KEGG   Aeromonas hydrophila AH10: VU14_20825
Entry
VU14_20825        CDS       T03886                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ahi  Aeromonas hydrophila AH10
Pathway
ahi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ahi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VU14_20825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ahi03021]
    VU14_20825
   03400 DNA repair and recombination proteins [BR:ahi03400]
    VU14_20825
Enzymes [BR:ahi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     VU14_20825
Transcription machinery [BR:ahi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     VU14_20825
DNA repair and recombination proteins [BR:ahi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      VU14_20825
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: AKA19191
UniProt: A0A081UY42
Position
complement(4645286..4646275)
AA seq 329 aa
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcatgcgaaagtgactctcgagccacttgagcgtggctttggtcacacgctgggt
aatgccctgcgtcgtattttgctgtcttctatgcccggttgtgcagttactgaagtcgaa
attgacggggtactgcatgagtacagcagcaaagaaggtgtacaggaagacattcttgaa
atcctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcatgtaatctgccacctgactggcgccaatgctgaaatc
agcatgcgcctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgatgaagagcgtcctattggtcgcctgctgctggactccgcgttcagccccatc
gttcgtattgcctacaacgttgaggcagcacgtgtggagcagcgtaccgacttggacaag
ctggtcatcgacatggagaccaatggtactctggatcctgaagaagccatccgtcgttct
gccactattctggccgagcaactggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctgcgtcctgtcgatgatttg
gagctgacagttcgttctgcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtactgaagttgagttgcttaagactcctaacctcggtaagaagtccctg
actgagatcaaggacgtgttggcctcccgtggtctgtctcttggcatgcgcctcgagaat
tggccgcccgccagcatcgctgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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