KEGG   Aeromonas hydrophila subsp. hydrophila AL09-71: V428_04350
Entry
V428_04350        CDS       T03192                                 
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
ahr  Aeromonas hydrophila subsp. hydrophila AL09-71
Brite
KEGG Orthology (KO) [BR:ahr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ahr03009]
    V428_04350 (rumA)
Enzymes [BR:ahr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     V428_04350 (rumA)
Ribosome biogenesis [BR:ahr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    V428_04350 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 TRAM Cons_hypoth95 MTS Methyltransf_11 Met_10 RrnaAD Methyltransf_15 Methyltransf_23 PCMT Methyltransf_12 Methyltr_RsmB-F Ubie_methyltran Methyltransf_4 PrmA
Other DBs
NCBI-ProteinID: AHX31338
Position
916026..917348
AA seq 440 aa
MAQFFKPQKKSTQPQRIEFTVDSLDHHCVGIGRHQGKAIFIEGALPGEQVKARILEDKKQ
YAHAALQQVVTSAANRIAPFCSHYRECGGCSAQHLAEADQRAAKEAGLVSLFERLGNIQP
PALEPVLGGESRAYRRVCRLAIKFDKNGRCTRVGFRRRQSNDLVEIGGCPVLAEPLSVLI
TPLRECLNRLKSQRELGHAELIQAEQGILMLLRHTGRPTEADRAQLIEFARAQGIDLYLQ
AADEQIEPLHQQFAPSYSLDGLSLAFAPGDFIQVNAPVNQRMVEQALSWLEAGKDDKVLD
LFCGIGNFTLPLARQAREVVGVEGELAMVARAEENARRNGINNARFYKADLSGDIAGMSW
AREGFDLVLLDPARPGAFEVMEHVVKLSPRRVVYVSCNPVTLARDSQVLVKGGYRLVRLG
MLDMFPHTGHLESMALFERK
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcccagtttttcaagccccaaaagaaatccacccagccccaacgcattgaatttacg
gtagacagcctggatcaccactgcgtcgggatcggccgccaccagggcaaggcgatcttc
atcgaaggggcgctacccggtgagcaggtcaaggcccgcatcctcgaagacaagaagcag
tatgcccacgcagccctgcaacaggtggtgacgtcggcggccaatcgcatcgcccccttc
tgcagccactaccgcgagtgcggcggctgcagtgcccagcacctggccgaagcggatcag
cgcgccgccaaggaggccggcctggtcagcctgttcgagcggctcggcaacatccagcct
ccggcgctcgagcccgtgctgggcggagagtcccgcgcctatcgccgggtctgccggctg
gccatcaagttcgacaagaacggccgctgcacccgggtgggctttcgtcgccgtcagtcg
aacgatctggtggagatcggcggttgcccggtgctggccgagccgctctctgtgctgatc
accccgctgcgcgagtgtctcaaccgtctcaagagccagcgcgagctgggccatgcggag
cttatccaggccgagcaggggatcctgatgctgctgcgtcataccggccggccgaccgag
gcggatcgggcgcagctgatcgagtttgccagggcgcaggggatcgatctctatctgcag
gcggccgacgagcagattgagccgctgcaccagcagtttgccccctcctactcgctggat
ggcctgtctcttgcattcgctcccggtgacttcattcaggtcaatgcgccggtcaaccag
cgcatggtggagcaggcgctctcctggctggaggcaggcaaggatgacaaggtgctcgat
ctgttctgcggcatcggcaactttaccctgccgctggcccgtcaggcccgcgaagtggtg
ggggttgaaggggagctggccatggtggcgcgcgccgaagagaacgcccgtcgcaacggc
atcaacaatgcccgtttttacaaggcggacttgagcggcgacatcgccggcatgtcctgg
gcacgggaaggtttcgatctggtgctgctggatccggcccgtcccggcgcgttcgaggtg
atggagcatgtcgtgaaactttcacccagacgggtggtctacgtttcctgtaatccggtc
accctggcgcgcgacagccaggtgctggtgaaagggggctaccggctggtgcgcctcggc
atgctcgacatgttcccccacaccggccatctggagtccatggcgctgttcgagcgcaag
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system