KEGG   Aeromonas hydrophila subsp. hydrophila AL09-71: V428_17515
Entry
V428_17515        CDS       T03192                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
ahr  Aeromonas hydrophila subsp. hydrophila AL09-71
Pathway
ahr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ahr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    V428_17515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ahr03400]
    V428_17515
Enzymes [BR:ahr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     V428_17515
DNA repair and recombination proteins [BR:ahr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     V428_17515
 Prokaryotic type
     V428_17515
SSDB
Motif
Pfam: UDG Virulence_RhuM
Other DBs
NCBI-ProteinID: AHX33781
Position
complement(3845784..3846452)
AA seq 222 aa
MQTWTDVIGSEKEQDYFKATLATVRSEREAGKVIYPPATDVFNAFKLTELDQVKVVILGQ
DPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVTPSHGFLESWARQGVLLLN
TVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLLWGAHAQKKGRFIDRQRHHVL
SAPHPSPLSAHRGFIGCGHFSETNRLLSQQGMSPINWHSVCE
NT seq 669 nt   +upstreamnt  +downstreamnt
gtgcagacctggactgatgtaattggctccgagaaggagcaggactatttcaaggcgacc
ctggcgaccgtcaggagtgaacgggaggcgggcaaggtgatctatccgccggcgaccgac
gtgttcaatgccttcaagctgaccgagctggatcaggtcaaggtggtgatcctgggtcag
gatccgtatcacggccccaatcaggcgcacggtctctgcttctcggtgttgcccggggtg
cgcacgcccccctcgctggtcaacatctacaaggagatgcagcgggatctgccgggtttt
gtcacacccagtcacggctttctggagtcctgggccagacagggggtgctgctgctcaat
accgtgctgacggtccaggcgggacaggcccactcccatgcacacctgggctgggagacc
ttcaccgaccgggtcatcgagcagatcaatgccagctgtcagggggtggtcttcctgctg
tggggggcccatgcccagaagaaggggcgcttcatcgacaggcagcgtcatcacgtgctg
agcgcgccgcatcccagcccgctctctgctcatcgcggcttcatcggctgtggccacttc
tccgaaaccaaccggctgctgagtcagcaggggatgagccccatcaactggcactcggtc
tgcgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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