KEGG   Arachis ipaensis: 107604945
Entry
107604945         CDS       T04301                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
aip  Arachis ipaensis
Pathway
aip03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107604945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107604945
Enzymes [BR:aip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     107604945
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     107604945
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 SRPRB ATP_bind_1 MMR_HSR1 AAA_24 FtsK_SpoIIIE ABC_tran GTP_EFTU AAA_29
Other DBs
NCBI-GeneID: 107604945
NCBI-ProteinID: XP_020960466
Position
B06:112547763..112550919
AA seq 435 aa
MAMAHSGGASSSGVKQQVELEKESELRIEVGNDAPLCLRLLNGNAEIFGTELAPEIWLNF
PPRLKFAVFTWYGATIEMEGTTETDYTADETPMVSYVNVHAILEARRTRAKASSSGDSES
SQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGSKPTFVDLDIGQGSITIPGCLAATPIEMP
IDPVEGITLEMPLVYFFGHTTPSNNVELYKVLVKELGGMLERQFAGNAESRASGMVINTM
GWIEGVGYDLLLHAIRTLKANVVLVLGQEKLYSMLRDVLKGEPKVDVVKLQRSGGVVSRN
VKVRQKARSFRIREYFYGLLNDLSPHSNIANFSDLCVYRIGGGPQAPRSALPIGAEPVAD
PTRVVPVNINRDLLHMVLAVSFAKEPEEIISSNVAGFIYVTDVDIQRKKITYLAPSAGDL
PSKFLILGSLTWLET
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggcaatggcgcacagtggcggtgcatcgagctcaggggtgaaacagcaggtggaattg
gagaaagaaagcgagctccggattgaggttggaaacgatgctcctctttgccttcgcctt
ctcaatggaaatgccgagattttcggcactgagcttgcacccgaaatttggctcaacttc
cctccccgactcaaattcgctgtttttacttggtatggtgctaccattgaaatggaaggt
actactgaaactgattatactgctgatgagacaccaatggttagctatgttaatgtgcat
gcaatattagaagccagaagaactcgtgctaaagcttcatcctctggtgattctgaatct
tctcaggggcctagagtgattgttgtaggacctactgactccggaaagagtaccttgtcg
aggatgcttcttagctgggcggctaagcagggttcaaagcctaccttcgttgacttggat
attggacagggatctataacgattcctggatgccttgctgctactccaattgaaatgccc
attgaccctgttgaaggaattactcttgagatgcctcttgtttacttttttggccataca
actccaagtaacaatgtagaattgtataaagtgctagtcaaggaacttggggggatgcta
gagagacaatttgctggaaatgccgaatctcgtgcttcgggcatggtgataaataccatg
gggtggatagagggagtaggctatgatttgctattgcatgcaattcgtacacttaaggcc
aatgttgtcttagttttgggtcaggaaaaactgtacagcatgctcagagatgtcctgaag
ggagagcccaaagttgatgttgtgaaacttcaaagatctggtggagttgtatccaggaat
gtgaaggtccgccagaaggccagaagttttaggataagagagtacttctatggccttctt
aatgatctctctccacattctaatattgctaattttagtgacttgtgcgtctatcggatt
ggtggtgggccacaggctcctcgctcagccttaccaatcggagcagaacctgttgctgac
ccaacaagagttgttcctgtgaatataaaccgtgatttgctccacatggtccttgcagtc
tcatttgccaaggaacccgaagagatcatttcaagcaacgttgctggctttatctacgta
acagatgttgacattcagagaaagaagataacttaccttgcaccatccgctggagatctt
ccaagcaagtttttgatactgggatccttgacatggcttgagacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (30)   

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