KEGG   Arachis ipaensis: 107605849
Entry
107605849         CDS       T04301                                 
Name
(RefSeq) polyadenylate-binding protein 8
  KO
K13126  polyadenylate-binding protein
Organism
aip  Arachis ipaensis
Pathway
aip03015  mRNA surveillance pathway
aip03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107605849
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107605849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107605849
   03041 Spliceosome [BR:aip03041]
    107605849
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     107605849
   mRNA cycle factors
    Stress granule specific factors
     107605849
Spliceosome [BR:aip03041]
 Complex C
  Other components
   Complex C specific factors
    107605849
SSDB
Motif
Pfam: RRM_1 PABP RRM_occluded YflT RRM_7 MARF1_RRM1 HobA DUF5062
Other DBs
NCBI-GeneID: 107605849
NCBI-ProteinID: XP_016163256
Position
B07:complement(112501522..112504824)
AA seq 640 aa
MAQVQVSPNANGDSAAAAAFVPNQSVMTSLYVGDLDRNVKDPQLYDLFNQIGQVVSARVC
RDLATQQSLGYGYVNFSNPQDAARALDVLNFTPLNNKPIRIMYSHRDPSSRTSGAANIFI
KNLDKSIDHKALHDTFSSFGTILSCKIATDPSGQSKGFGFVQFEKEESAQNAIDKLNGML
INDKQVYVGHFQRKQDRESVLSANTKFSNVYVKNLSESMSDDNLKKIFGEYGTITSAVVM
RDLDGKSKCFGFVNFENADDAAKAVEALNGKKFDDKEWYVGKAQKKSERELALKERFEQS
MKEAADKYQGANLYLKNLDDSIDDVKLRELFSDFGTITSCKVMRDPHGVSRGSGFVAFSS
PEEATRALGEMKGKLISGKPLYVALAQRKEERRAKLQAQFSQMTHVSMAPSVAPHLPLYP
PRAMGLGHPFLYGQAPPAVLPQAGFGYQQQLVPGMRPGAPMPSFFVPVVQQGQQGQRPGV
RRGTGPVQQPQQPVPMMQQQMLPRGRGHRYPGGRNMQEVPMLAVNYDMGALPIRDAMGQP
MPIQALATALANAPPGQQRTMLGEALYPLVDKLEHDAAAKVTGMLLEMDQPEVLHLIESP
DALKAKVAEAMDVLKNVAQQQTNAPADQLASLSLNENLVS
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcacaagttcaggtgagccccaatgcgaacggtgattccgccgccgccgctgctttt
gtcccgaaccagtcagtgatgacgtcactgtacgttggagatctcgaccgcaacgtcaag
gatccgcagctctacgatctcttcaaccagatcggtcaggtcgtctccgctcgcgtctgc
agggacttggccacccagcaatccctgggttacggttacgtcaatttcagtaaccctcaa
gacgcggcaagagcattggatgtgttgaatttcactccattgaacaataaaccgattagg
atcatgtattctcatcgggaccctagctcccgcactagcggcgctgctaatatatttatc
aagaatttggataagtcgattgatcataaggctctgcatgatactttttcctcttttggg
actattctttcttgcaagatagccacagatccttctgggcagtcaaaaggatttggcttt
gtgcaatttgagaaggaagagtctgctcaaaatgccattgacaagttgaatggaatgctg
ataaatgacaaacaggtttacgtggggcattttcaaagaaagcaggatagagagagtgtc
ttaagcgccaatacaaaatttagtaatgtgtatgtaaagaacctgtcagagtccatgtcg
gatgataacttgaagaaaatttttggggagtatgggacaattactagtgctgtagtgatg
agagatttagatggtaaatcgaaatgttttggttttgtcaattttgaaaatgctgatgat
gctgctaaagctgttgaggcactcaatggaaagaaatttgatgataaggagtggtacgtt
gggaaagcccagaagaaatccgaaagggagcttgccctgaaggagcgatttgagcagagt
atgaaggaagctgctgacaaatatcaaggtgctaacttgtatctcaagaacttggatgat
agcatcgatgatgtaaagctcagggaactcttctcagattttggtacaataacttcatgc
aaggttatgcgtgatccacatggagtcagtagagggtctgggtttgttgcattttcatct
cctgaggaagctactcgagctctcggagaaatgaaagggaaattgatttctggcaaacct
ctctatgttgcccttgcacagagaaaagaagaaagaagagccaagttgcaggcccagttt
tctcaaatgacgcatgtatcaatggctccttctgttgcacctcatctcccgctctatcct
ccaagggccatgggtcttggacatccatttttgtatgggcaggcacctccagctgtcctt
cctcaagctggatttggttatcagcagcaacttgtgcctggaatgaggccaggggctcca
atgccaagcttctttgttccagtcgttcagcagggtcaacaaggacagcgcccaggtgtc
cgtcgaggaacaggtcctgtgcaacaaccacagcagccagtgccgatgatgcagcagcag
atgcttccaaggggacgtggccatcgttatccaggtggtcgcaacatgcaggaggttcca
atgcttgcagtcaactatgacatgggagctctgcccatccgggatgcgatgggacaacca
atgcccattcaggccttggctactgcccttgcaaatgctcctccaggacagcagaggact
atgcttggtgaagctttatacccacttgttgataagctggaacatgatgctgcagcaaag
gttacaggcatgcttttggagatggaccagcctgaagtgttgcatctgattgagtcaccc
gatgctctcaaggcaaaagttgccgaggccatggacgtgttgaaaaatgttgctcagcag
caaaccaatgccccagctgatcaactcgcctccctctctctcaatgagaatcttgtgtct
tag

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