KEGG T00455: Ajs

Acidovorax sp. JS42: Ajs_0311

Entry

Ajs_0311 CDS T00455

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ajs Acidovorax sp. JS42

Pathway

ajs03410	Base excision repair
ajs03420	Nucleotide excision repair
ajs03430	Mismatch repair
ajs03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ajs03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ajs03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ajs03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ajs03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DUF3048 mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

316483..318162

AA seq 559 aa
MQAFAALYQALDASTSSLAKQAALRDYLRGAPPEDAAWAVYFLAGGKPRQLVPTKLLRAV
AREAAGLPEWLFDESYEAVGDLAETIALLLPPPTQAHALGLAAWMREHLLPLRGLAPDTQ
AERLGAQWARLAPEERLVYFKLITGAFRVGVSRLQVTQALAAVSGVDAKRIAQRLMGYTH
VGAQPGAADYQRLVAPQGDSAGAQAAEAQGHPYPFFLAHPLQLPVAQFDAALGPPADWIV
EWKWDGIRAQLVRRAGATWLWSRGEELVTDRFPELQALGDEALPDGTVLDGEIVVWQPER
ADAPAQPRPFADLQKRIGRKSLGPKLLREVPVVLLAYDLLEEHGQDLRGLPLQARRARLD
ALLARTDHPALVPSPVLQGQSWAELARLRDSARALGVEGMMLKGRTAHYGVGRTRDVGIW
WKWKIDPMSVDAVLIYAQRGHGRRASLYSDYTFAVWSAPQGTEGRTLVPFAKAYSGLTDA
EMARVDAIIRKTTVESFGPVRSVRPTLVFELGFEGIARSARHKSGIAVRSPRMLRWREDK
PVDEADSLDTLAALLPATP

NT seq 1680 nt +upstreamnt +downstreamnt
atgcaggcctttgccgcgctctaccaggcgctggatgccagcacgtccagcctcgccaag
caggccgcgctgcgcgactatctgcggggtgcgccacccgaggatgccgcctgggccgtc
tacttcctcgcgggtggcaaaccacgccaactcgtgcccaccaagctgctgcgcgcggtg
gcgcgcgaggcggcggggttgccggaatggctgttcgacgaaagctacgaggctgtgggc
gatctggccgagaccatcgcactgctgctgcccccgcccacgcaggcacacgccctgggg
ctggccgcatggatgcgcgaacacctcttgccgctgcgcggcctggcgcccgacacccag
gctgaacggctgggtgcgcaatgggcgcggctggctcccgaggagcggctggtgtacttc
aagctcatcacgggggccttccgcgtgggcgtgtcgcgcttgcaggtcacgcaggcgctc
gcggccgtgagcggcgtggacgccaagcgcatcgcccagcgcctcatgggctacacgcac
gtgggcgcgcagcccggggcggctgactaccagcgcctcgtggcgccccagggagacagt
gcgggcgcgcaggctgcggaggcccagggccatccctatcccttctttctggcgcacccg
ctgcagctgccggtggcgcagtttgacgccgcgctcggcccgccggcggactggatcgtg
gaatggaagtgggacggcatccgcgcccagctcgtgcggcgcgctggcgccacttggctg
tggtcgcgcggggaggagctggtgaccgatcgcttccccgaactgcaggcgctgggcgac
gaagccctgcccgacggcacggtgctcgacggcgagatcgtcgtctggcagcctgagcga
gcggatgcgccggcgcagccgcgcccgtttgccgacctgcaaaagcgcatcggccgcaag
tcgctgggccccaagctgctgcgcgaggtgcccgtggtgctgttggcctacgacctgctg
gaggagcacggccaggacctgcgcggcctgccgctgcaggcgcggcgcgcgcggctggac
gcgctgctggcgcgcaccgaccacccggcgctggtgcccagcccggtgctgcagggacag
agctgggcagaactggcccgcctgcgggacagcgcgcgtgccctgggcgtggagggcatg
atgctcaaagggcgcacggcgcactatggtgtgggccgcacgcgggacgtgggtatctgg
tggaagtggaagatcgacccgatgagcgtggacgccgtgctcatctatgcgcagcgcggc
catgggcgccgcgccagcctgtacagcgactacacgttcgccgtgtggagtgcgccgcag
ggcaccgaggggcgcacgctggtgccgtttgccaaggcgtattcgggcctcaccgatgcc
gagatggcgagggtggacgccatcatccgcaagaccacggtggagagcttcggcccggtg
cgcagcgtgcggcccacgctggtgttcgaactgggttttgagggcatagcgcgcagcgcg
cggcacaagagcggcatcgccgtgcgctccccgcgcatgctgcgctggcgtgaagacaag
ccggtggacgaagccgattcgctggatacgctggcagcgctgttgcctgctacgccctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-AJS (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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