KEGG   Acidovorax sp. JS42: Ajs_0899Help
Entry
Ajs_0899          CDS       T00455                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ajs  Acidovorax sp. JS42
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ajs00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Ajs_0899
Enzymes [BR:ajs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Ajs_0899
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Ajs_0899
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
948189..949004
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRRSFAGAIEGATVRGITVGKPLRWPLGTEPAVLVGRRVCGVRRRGKYLLL
DLDEGLLLIHLGMSGSLRFARDLPARGAHDHFELITDQGTLRLHDPRRFGAVVWAAGESD
PRARKLLDGWGLEPLGEDFAFETFHAGLRAKRTPIKQLLLAGTVVVGVGNIYACEVLFLA
GIRPTTRACAIGPQRARRLHGAIREVLARAVERGGSTLRDFSSADGSAGHFQLEANVYGR
AGLPCRQCGTPVRLLRQGQRSTYFCPHCQRA
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgccggaggtggaagtcacgcggcgcagcttcgctggcgcgatcgagggc
gcaactgtccgcggcattacggtgggcaagcccttgcgctggccgctgggcacggagccc
gcagtattggtcggacggcgcgtgtgcggtgtgcgccggcgcggcaaatacctgttgctg
gatctggatgaagggctgctgctcattcacctgggcatgtcgggcagcttgcgctttgcg
cgcgatctgcccgcgcgcggcgcccacgatcatttcgaactgataacggaccagggcacg
ctgcggctgcacgacccgcggcgcttcggcgccgtggtctgggcggcgggtgagtccgat
ccccgtgcacgcaagctgctcgatgggtggggattggagccgctgggcgaggacttcgcc
ttcgagaccttccacgcggggctgcgcgccaaacgcacgcccatcaagcaactgctgctc
gcgggcacggtggtcgtgggtgtgggcaatatctatgcctgcgaggtgctgttcctcgcg
ggcatccggccaaccacccgcgcttgcgcgatcggaccccagcgagcccggcgcctgcac
ggcgcaatccgcgaggtgctggcgcgcgcggtggagcggggcggcagcacgctgcgcgat
ttctccagcgccgacggcagcgccgggcatttccaattggaggccaatgtctatggccgc
gcgggcctgccgtgtcgccagtgcggtacgcccgtgcgtctgttgcgccaggggcagcgc
agcacctatttctgtccgcactgccagcgcgcctga

DBGET integrated database retrieval system