KEGG   Acidovorax sp. JS42: Ajs_0899Help
Entry
Ajs_0899          CDS       T00455                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ajs  Acidovorax sp. JS42
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ajs00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Ajs_0899
Enzymes [BR:ajs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Ajs_0899
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Ajs_0899
DNA repair and recombination proteins [BR:ajs03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Ajs_0899
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
948189..949004
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRRSFAGAIEGATVRGITVGKPLRWPLGTEPAVLVGRRVCGVRRRGKYLLL
DLDEGLLLIHLGMSGSLRFARDLPARGAHDHFELITDQGTLRLHDPRRFGAVVWAAGESD
PRARKLLDGWGLEPLGEDFAFETFHAGLRAKRTPIKQLLLAGTVVVGVGNIYACEVLFLA
GIRPTTRACAIGPQRARRLHGAIREVLARAVERGGSTLRDFSSADGSAGHFQLEANVYGR
AGLPCRQCGTPVRLLRQGQRSTYFCPHCQRA
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagctgccggaggtggaagtcacgcggcgcagcttcgctggcgcgatcgagggc
gcaactgtccgcggcattacggtgggcaagcccttgcgctggccgctgggcacggagccc
gcagtattggtcggacggcgcgtgtgcggtgtgcgccggcgcggcaaatacctgttgctg
gatctggatgaagggctgctgctcattcacctgggcatgtcgggcagcttgcgctttgcg
cgcgatctgcccgcgcgcggcgcccacgatcatttcgaactgataacggaccagggcacg
ctgcggctgcacgacccgcggcgcttcggcgccgtggtctgggcggcgggtgagtccgat
ccccgtgcacgcaagctgctcgatgggtggggattggagccgctgggcgaggacttcgcc
ttcgagaccttccacgcggggctgcgcgccaaacgcacgcccatcaagcaactgctgctc
gcgggcacggtggtcgtgggtgtgggcaatatctatgcctgcgaggtgctgttcctcgcg
ggcatccggccaaccacccgcgcttgcgcgatcggaccccagcgagcccggcgcctgcac
ggcgcaatccgcgaggtgctggcgcgcgcggtggagcggggcggcagcacgctgcgcgat
ttctccagcgccgacggcagcgccgggcatttccaattggaggccaatgtctatggccgc
gcgggcctgccgtgtcgccagtgcggtacgcccgtgcgtctgttgcgccaggggcagcgc
agcacctatttctgtccgcactgccagcgcgcctga

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