KEGG Acidovorax_JS42: Ajs

Acidovorax sp. JS42: Ajs_1660

Entry

Ajs_1660 CDS Acidovorax_JS42

Gene name glyA

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway ajs00260 Glycine, serine and threonine metabolism
ajs00460 Cyanoamino acid metabolism
ajs00670 One carbon pool by folate
ajs00680 Methane metabolism
ajs01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:ajs00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:ajs00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:ajs00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:ajs00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Cys_Met_Meta_PP Aminotran_5
OKR_DC_1 Alum_res
PROSITE: SHMT

Other DBs NCBI-GI: 121594031
NCBI-GeneID: 4671096
JGI: Ajs1660
UniProt: A1W6H6

Position complement(1720548..1721792)

AA seq 414 aa
MYQRNILVEQTDPEVWAAIQAEDRRQEEHIELIASENYASPAVMAAQGSQLTNKYAEGYP
GKRYYGGCENVDVIEQLAIDRIKQLFGAEAANVQPNSGSQANQAVLMAFLKPGDTILGMS
LAEGGHLTHGMPLNMSGKWFNVVSYGLNDKEEIDYDALEAKAREHKPKLIIAGASAYALR
IDFERFAKIAKEVGAIFWVDIAHYAGLVVAGEYPNPVPFADVVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGLQGGPLEHVIAAKAVAFKEALSPEFKQYQQQVTKNAKVFAETLI
QRGLRIVSGRTESHVMLVDLRAKGITGKEAEAALGKAHITINKNAIPNDPEKPMVTSGIR
VGTPAITTRGFKEEETRLTANLVADVLDNPHDEANLEAVRAKVHALTSRFPVYR

NT seq 1245 nt +upstreamnt +downstreamnt
atgtaccaacgcaatattcttgtcgaacaaaccgatcccgaggtgtgggccgccatccag
gccgaagaccgccgccaggaagagcatatcgagctgatcgccagcgaaaactacgcctcg
cccgccgtgatggccgctcagggctcgcagctcaccaacaagtacgccgaaggctaccct
ggcaagcgctactacggcggctgcgagaacgtggacgtgatcgagcagttggccatcgac
cgcatcaagcaactcttcggcgccgaagcggccaatgtgcagcccaactcgggttcgcag
gccaaccaggctgtgctgatggccttcctgaagcccggcgacaccattctgggcatgagc
ctggccgagggcggccacctcacgcacggcatgccgctgaacatgagcggcaagtggttc
aacgtagtctcctacggactgaacgacaaggaagagatcgactacgatgcgctggaagcc
aaggcccgcgagcacaagcccaagctgatcatcgccggcgcctccgcctacgccctgcgc
atcgacttcgagcgcttcgcgaagatcgccaaggaagtcggcgccatcttctgggtggac
attgcccactatgccggcctggtcgtcgcgggcgagtaccccaacccggtgccgtttgcg
gacgtggtgacctccaccacgcacaagagcctgcgaggcccacgcggcggcatcattctg
atgaaggcggagcacgagaaggccatcaacagcgccatcttccccggcctgcagggcggc
ccgctggagcacgtcatcgccgccaaggccgtggccttcaaggaagccctgtcgcccgag
ttcaagcagtatcagcagcaggtgaccaagaacgccaaggtgttcgcggaaacgctgatc
cagcgcggactgcgcatcgtgagcggtcgcaccgaaagccacgtgatgctggtggacctt
cgcgccaagggcatcaccggcaaggaggccgaggcagccctgggcaaggcccatatcacg
atcaacaagaacgcgatccccaacgatcccgaaaagccgatggtcaccagcggcattcgc
gtgggcacgcccgccatcacgacacggggtttcaaggaagaggaaacgcgcctcacggcc
aacctggtggccgacgtgctggacaacccgcatgacgaggcgaacctggaagccgtgcgc
gccaaggtgcacgcgctgaccagccgcttcccggtctatcgctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   JGI-AJS (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (7)   
   PROSITE (1)   
All databases (27)

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