KEGG   Acinonyx jubatus (cheetah): 106972465
Entry
106972465         CDS       T04657                                 
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
  KO
K14318  nuclear pore complex protein Nup88
Organism
aju  Acinonyx jubatus (cheetah)
Pathway
aju03013  Nucleocytoplasmic transport
aju05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:aju00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106972465
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    106972465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aju03019]
    106972465
Messenger RNA biogenesis [BR:aju03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106972465
SSDB
Motif
Pfam: Nup88 DUF4404
Other DBs
NCBI-GeneID: 106972465
NCBI-ProteinID: XP_026903031
UniProt: A0A6J1YDC7
Position
E1:1326597..1352219
AA seq 741 aa
MAAAEGPAGDGEPWQSWLPNHAVFLRLREGLKSQSQSPAEAEKPTGSPSPSSPPLLTRNL
VLGLGGELFLWDADDSSFLVVRLRGLGGWGEEPSLSQYQRLLCINPPLFEIYQVLLSPTQ
QHVALIGMKGLTVLELPKRWGKNSEFEGGKLTVNCSTTPVAERFFTSSASLTLKHAAWYP
SELLDPHVVLLTSDNVIRIYSLREPQTPVKVIVLSEAEEESLILNKRRAYTASLGETAVA
FDFGPLSAVPKTMFGQKGKGDIVGYPLYILYENGETFLTYVSLVHSPGTVGKLLGPLPMR
PAAEDNYGYDACAILCLPCVPNILVIATESGVLYHCVVLEGEEEDEQTSETSWDPRADLV
PSLYVFECVELELALKLASGEDDPFDSDFSCPIRLHRDPKCPSRYHCTHEAGVHSVGLTW
IHKLHKFLGSDEEDKDSLQELAAEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPTM
ICVTSSYECLIRPLLSTVHPVSPPLLCTQEDKAAEESPLRILAETPDSFEKHIRSILQRS
VANPAFLKSCDRDAAPPPGDSLQLLSRATQVFREQYVLKQDLAKEEIQRRVRLLCDQKKK
QLGDLSYCREERKSLREMAERLADKYEEAKEKQEDLTNRMQTVLHSFRAQLPVLSDSERD
MKKELQLIPEQLRHLGNAIKQVTMKKDYQQRKMEKVPSPQKPTIALSAHQRRCIQSVLRE
EGEHIREMVKQINDIRHHVTF
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcggcagccgaggggcccgcgggcgacggggagccgtggcagtcctggcttcccaac
cacgccgtgttcttgcggctccgcgaggggctgaagagccagagccagagcccggccgaa
gccgagaagccgacgggttccccgtcgccctcgtcgccgccgctgctcacgaggaacctg
gtgttgggcctgggcggagagctcttcctgtgggacgcggacgacagctccttcctggtg
gtccggctgcggggcctcggcggctggggcgaggagccctccctctcccagtaccagagg
ttgctttgcataaatccgcccctgtttgaaatctatcaagtcctgttaagtcccacgcag
cagcatgtggcactcataggaatgaaaggacttacggtgttagagctgcccaaaagatgg
gggaagaattctgaattcgaaggcggaaaactaacagtgaattgtagcaccacgcctgtc
gccgagaggttcttcaccagctcggcctccctgactctgaagcacgccgcctggtacccg
agtgagctgctggacccccacgtcgtgctgctgacctcggacaacgtgatcaggatctac
tctctccgtgagcctcagacacccgtcaaggtcattgtgctttcagaagcggaagaggag
agcctgatactcaataaaagaagggcatacactgcgtctctgggcgagacagcggtggcg
tttgacttcgggccgttgtcagcggtcccgaagaccatgtttggacagaaaggcaaaggt
gacatagtggggtacccgctgtacatcttgtacgagaacggagagaccttcctcacgtac
gtcagtctggttcacagccccgggaccgtcgggaagctgctaggcccgctgcccatgcgc
cccgcggcagaggacaactacggctacgacgcctgtgccatcctctgcttgccctgcgtc
cccaacatcctggtgatcgccacggagtcgggcgtgctgtaccactgcgtcgtgctggaa
ggggaggaggaagacgagcagacgtcggagacgtcctgggaccccagggccgacctcgtc
ccctccctgtacgtgttcgagtgcgtggagctggagctcgccctgaagctggcgtccggc
gaggatgacccctttgattctgacttctcttgtcccatcagacttcacagagatcccaag
tgtccctcgaggtaccactgcactcacgaagccggcgtccacagtgtcgggctgacttgg
attcataagcttcacaaatttctcgggtcagatgaggaggacaaggacagcctccaggag
ctcgctgcggaacagaagtgcttcgtggagcacatcctgtgtacgaagccgctgccctgc
aggcagccggcaccgattcgagggttctggatcgtcccagacatcctggggcccacgatg
atctgtgtcaccagcagctacgagtgcctcatcaggcctttgttaagcacggtccatccg
gtgtcccctcccctgctctgcacccaggaagacaaggcagcggaagagtctcccctccgc
attctggccgaaaccccggattcctttgaaaagcacatcagaagcattttgcagcgcagc
gttgcgaatccggcgtttctgaagtcatgtgacagagacgcggcccctccgccgggagac
agcctgcagctcctcagccgggccacgcaggtgttccgggagcagtacgtcctcaagcag
gacctggccaaggaggagatccagcgcagggtcaggctattgtgtgaccagaagaagaaa
cagctgggagacctgagttactgccgggaggagaggaaaagcctccgggagatggcggag
cgcttggccgacaagtacgaggaggccaaggagaaacaggaggatctcacgaacaggatg
cagacggtcctgcacagcttccgcgcccagctccccgtcctgtccgacagcgagcgggac
atgaagaaggagctgcagctgatccccgagcagctccgccacctgggcaatgccatcaaa
caggtgaccatgaagaaggactaccagcagcggaagatggagaaggtgccgagccctcaa
aagcccaccatcgccctgagcgcccaccagcgcaggtgcatccagtccgtcctgcgggaa
gagggcgagcacatccgagagatggtgaagcagatcaacgacatccggcaccacgtcacc
ttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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