KEGG   Advenella kashmirensis: TKWG_13425
Entry
TKWG_13425        CDS       T02117                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
aka  Advenella kashmirensis
Pathway
aka02024  Quorum sensing
aka03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aka00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TKWG_13425 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TKWG_13425 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aka03019]
    TKWG_13425 (hfq)
   03036 Chromosome and associated proteins [BR:aka03036]
    TKWG_13425 (hfq)
Messenger RNA biogenesis [BR:aka03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     TKWG_13425 (hfq)
Chromosome and associated proteins [BR:aka03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    TKWG_13425 (hfq)
SSDB
Motif
Pfam: Hfq LSM SRP14
Other DBs
NCBI-ProteinID: AFK62797
UniProt: I3UCQ9
Position
complement(2322290..2322532)
AA seq 80 aa
MSTKGQSLQDPFLNALRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVSFQIDAPAEQE
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagcactaaagggcaatcactacaagatcctttcctgaacgcgttacgtaaagaacat
gttcccgtttccatttaccttgtaaatggaatcaaattgcaagggcagatcgaatccttt
gaccagtacgtcgtattgttgcgcaatacggtaacgcaaatggtctacaagcatgctatt
tctacagttgtccccgcaagggccgtcagtttccaaattgacgcaccagctgaacaggaa
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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