KEGG   Acinetobacter lactucae: OTEC02_17335
Entry
OTEC02_17335      CDS       T05220                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
alc  Acinetobacter lactucae
Pathway
alc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:alc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OTEC02_17335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alc03021]
    OTEC02_17335
   03400 DNA repair and recombination proteins [BR:alc03400]
    OTEC02_17335
Enzymes [BR:alc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OTEC02_17335
Transcription machinery [BR:alc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     OTEC02_17335
DNA repair and recombination proteins [BR:alc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      OTEC02_17335
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 RelB DOCK-C2
Other DBs
NCBI-ProteinID: ARD30370
Position
complement(3658907..3662995)
AA seq 1362 aa
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIADNDGKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AENITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADTTAGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDAVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGAIEYVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNIIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDAYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLVEDVLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDAEVLALSGNLRAGVP
LATPVFDGAEEGQIKDLLELAGISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq 4089 nt   +upstreamnt  +downstreamnt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttactatcgattcaggtcgattcgtacagaacattcttgcaa
gatggcaaaactccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatcgaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aaacctgagttcgatgtacgcgaatgtattcttcgtggttcgacttatgcggcaccaatg
cgcgttaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagacgtacga
gaacaagaagtctatatgggtgaaattccactcatgactgaaaacggtacattcgtcatt
aatggtactgagcgtgtaatcgtatctcaattacaccgttcaccaggcgttttctttgat
cacgataaaggtaaaacccactcaagtggtaaagtgttgtattcagcacgtattattcct
taccgtggttcatggttagacttcgaatttgatgcgaaagacttagtttacgtacgtatt
gaccgtcgtcgtaaattacttgctactgttgtattacgtgcactgggttataacaacgaa
caaatcttgaatttgttctatgaaaaagtacctgtgtatcttgatatgggcagttaccag
attgatctagtccctgaacgtttacgtggggaaatggcgcaatttgatattgctgacaat
gacggtaaagttattgttgagcaaggtaagcgtattaatgctcgtcacgtacgtcaaatg
gaagctgctggtttaacaaaactttcagttccagatgaatacttatatgagcgtattact
gctgaaaatattactttacgtgatggtgaagtaattgctgctaatactttgttaagccat
gaagttatggtgaaactagcagaaggtggtgttaaacagttcaatatcttgtttacgaac
gatattgaccgtggttcgtttgttgctgacacattacgtgcagatacaacagctggccgt
gaagaagcattagttgaaatttataaagtaatgcgtccaggcgagccgccaacaaaagaa
gctgctgaaaacttattcaataacttattcttctcttctgagcgttatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtttgggtcgtccatacgaagttggtactgaccag
aaatcacgtgaagtagaaggtattttatcgcacgaagatatcattgatgtattacgtaca
ttagttgaaatccgtaacggtaaaggtgaagtcgacgatatcgatcacttgggtaaccgt
cgtgtacgttctgttggtgaaatgactgaaaaccaattccgtgttggtttggttcgtgtt
gaacgtgctgttaaagagcgtttaagccaagcagaaacagataacttgtctccgcaagat
ttaattaacgctaaaccagttgcagctgcaatcaaagaattctttggttcaagccagtta
tctcagttcatggaccaaaacaacccattatctgagattacccataagcgtcgtgtatca
gcgcttgggcctggtggtttaacacgtgaacgtgcaggctttgaggtacgtgacgtacat
caaactcactatggtcgtgtatgtccaattgaaacgccggaaggtccaaacattggtttg
atcaactcgctttctgtatatgcaaaagcaaatgacttcggtttcttggaaacaccttac
cgtaaagtggtagatggtcgagtaactgatgctgttgaatacctttctgctattgaagaa
gtaggtactgttattgcacaggccgattctgcagtagataaagatggcaacttaacagaa
gagtttgtttctgttcgtcatcaaggtgaattcgtacgtatgccaccagaaaaagtgacg
catatggacgtttctgctcagcaggttgtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcgaaccgtgcgcttatgggttcaaacatgcaacgtcaggcagttcct
actctacgtgcggataaaccgcttgtaggtacaggtatggaagcgaacgttgcacgtgac
tcaggtgtgtgtgtgatcgcaaaccgtggcggtgcaattgaatacgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatgattgctggtgaggctggtgtagatatctac
aaccttattaaatatacgcgttctaaccagaacacttgtattaaccaaaatattatcgtg
aatttaggcgacaaagttgctcgcggtgatatcttggcagacggtccgtctacagatatg
ggtgagcttgcgcttggtcaaaacatgcgcgttgcgttcatgacttggaatggttacaac
tacgaagactcgatcttattatctgagcgtgtacttcaagaagaccgtttaacttctatt
catattcaagaattatcttgtgtagcgcgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtgggtgaagctgcactttctaaacttgatgaatcaggtatcgtt
tatatcggtgctgaagttacagcaggtgacatccttgttggtaaagtaacgcctaaaggt
gaaactcagttaactcctgaagaaaaattgcttcgcgcaatctttggtgagaaagcagct
gatgttaaagattcatctttacgtgttccatctggtactaaaggtacagttattgacgtt
caagtcttcactcgtgatggcttagagaaagatgaccgtgcactagctatcgaaaaagca
cagcttgatgcttaccgtaaagacttgaaagaagaatacaagatctttgaagaagcagct
cgtgagcgtgtaattcgtttgcttaaaggccaagagtctaatggcggtggttcaactaaa
cgtggtgacaaactcgttgaagacgtgttatctggtttagagcttgttgatttgcttgaa
attcaaccagcagatgaagcaatcgctgagcgtttaactcaaattcaagtgttcttaaaa
gaaaagagcgcagaaattgacgagaaattcgctgagaagaaacgtaagcttgcaacaggt
gatgaattaacaactggcgtattgaaagttgttaaagtttacttagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcatggtaataaaggtgttgtatctaacatc
ctacctgttgaagacatgccacatgatgctaacggtgtaccagtagatatcgtattgaac
ccgttgggcgtaccatctcgtatgaacgtgggtcagattcttgagactcacttgggtatg
gcggctaaagggcttggtgataaaatcgaaaaaatgttgaaagaacaacgtacagtttta
gaactgcgtgaattcttagacaagatttataacaaagtcggtggtgagcaagaagatctt
gacagcttaactgatgctgaagttttagctctttcaggcaacttgcgtgctggtgtgcct
ttggctactcctgtatttgatggtgctgaagaaggtcaaattaaagacttacttgagtta
gctggtatctctcgtactggtcaaacagtattgtttgatggccgtactggtgaacagttt
gatcgccctgtaactgtgggttacatgtacatgctcaaattgaaccacttggttgatgac
aaaatgcatgcgcgttcaactggttcttactctcttgttacacagcaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaggtctgggcactcgaagcttac
ggcgcagcatatactctccaagagatgttaactgttaagtcggatgacgttgaaggtcgt
acacgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgattaa

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