KEGG   Poseidonibacter parvus: LPB137_07475
Entry
LPB137_07475      CDS       T04722                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
alp  Poseidonibacter parvus
Pathway
alp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPB137_07475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alp03019]
    LPB137_07475
   03016 Transfer RNA biogenesis [BR:alp03016]
    LPB137_07475
Enzymes [BR:alp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     LPB137_07475
Messenger RNA biogenesis [BR:alp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LPB137_07475
Transfer RNA biogenesis [BR:alp03016]
 Prokaryotic type
  tRNA degradation factors
   LPB137_07475
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KH_2 S1_2
Other DBs
NCBI-ProteinID: APW65700
UniProt: A0A1P8KMA8
Position
complement(1500775..1502955)
AA seq 726 aa
MSTVCEFELSKKQEIFEFGKVAKQANGSVLAKLGNAVVLATVVSEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFFKREAKASEFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
EVDIQALALNAANAALYTSNLPVKKSVCGVRVAKIDGEYVANPKMSELENSTLDLYIAGS
KDELLMIEMKSISSTDMVEVDIEAFTKVHNSNEVNETNLVEAIAFAQKALFEANSAYEAG
FEEACKDMKEVELVEFKIPEEVIVYVRNTYSSNITAAIEKLAKSERATELKDVAKMISID
SYCEENEIEFSVVYEAVSVVKREIVRKMIVNDKVRADGRGLKDVRPISIDTNILPSAHSS
CLFTRGETQALVVGTLAGAKDGQMYEMLTEKSTLIDRFMLHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKKALEPTIDNDYSETVRLVSEILESNGSSSMATVCGGSLALKAAGVPISDL
VAGVAMGMVVEDGKYSVLTDIMGLEDHDGDMDFKVAGTAKGITALQMDIKLGGIELSVLE
EALLQAKEGREHILGLMETAAAEIIPSEALPLIEQFAIDPSKIMVVIGKAGSTIKEIIEK
FSVGIDLDRDSGNVKVSGNNKQNVLDACEHIKTISNNAVSRKPHSKDLDFEKLYKVDDVV
MGKVERIVDFGAFVALPKGGEGLLHISKISKQRVKNVSDVLSVADEIEIKVLKVTKDRIE
LASNSI
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgtcaacagtttgtgaatttgaattaagtaaaaaacaagagattttcgagtttggaaaa
gtagctaaacaagcaaatggatctgtattagcaaaattaggaaatgcagttgtattagca
acagtagtaagtgaatttgataatcctgttagtgaagattttactcctttaacagttcaa
tatattgaaaaaacatacgcagcagcaaagttacctggaggtttctttaaaagagaagca
aaagccagtgaatttgaaacattaacttcaagagtaattgatagaagtttaagaccatta
tttccaaaaggttatgtttatcctacaactattactgtaatggttctaagtgcagataaa
gaagttgatattcaagcattagctttaaatgctgcaaatgctgcattatatacatcaaac
ttacctgttaaaaaatctgtttgtggtgttagagttgcaaaaattgatggtgaatatgta
gcaaatccaaaaatgagtgaattagaaaactcgactttagatttatatatagcaggttct
aaagatgaattattaatgattgaaatgaaatctatttcttcaactgatatggttgaagtt
gatattgaagcttttacaaaagttcataattcaaatgaagttaatgaaactaatttagtt
gaagctattgcttttgcacaaaaagctttatttgaagcaaatagtgcttatgaagcaggt
tttgaagaagcttgtaaagatatgaaagaagttgaattagttgaatttaaaattcctgaa
gaagttattgtttatgtaagaaacacttattcttcaaatattacagcggctattgaaaaa
ctagctaaaagtgaaagagctactgaacttaaagatgttgcaaaaatgatttctattgat
tcatattgtgaagaaaatgaaattgaattttcagttgtttatgaagcagtttctgttgtt
aaaagagaaatcgtaagaaaaatgattgtaaatgataaggtaagagctgatggtagaggt
ttaaaagatgttagaccaatttcaattgatacaaatattttaccttcagcacattcatct
tgtttatttactcgaggtgagacacaagcattagttgtaggaactttagctggagctaaa
gatggacaaatgtatgaaatgttaactgaaaaatcaacattaatagatagatttatgctt
cattataacttcccaggtttctcagtaggagaagctaaaccaatgtttggagtaggaaga
agagaattaggtcatggtaatttaggtaaaaaagccttagaaccaactattgataacgat
tattctgaaacagtaagattagtatcagaaattttagaatcaaatggttcttcatcaatg
gcaacagtatgtggtggttctttagcacttaaagcagctggtgttccaatttctgattta
gttgctggtgttgcaatgggtatggttgttgaagatggtaaatattctgtactaactgat
attatgggacttgaagatcacgatggtgatatggactttaaagttgcaggtacagcaaaa
ggtattactgctttacaaatggatattaaacttggtggaattgagttaagtgttttagaa
gaagcattattacaagcaaaagaaggacgagaacatattttaggtcttatggaaacagca
gcagcagagattattccaagtgaggctttaccattaattgaacaatttgcaattgatcct
agtaaaataatggttgttattggaaaagctggttcaacaattaaagaaataattgagaaa
ttctcggtaggaattgacttagatagagatagtggtaatgttaaagtaagtggaaataat
aagcaaaatgtattagatgcttgtgaacatattaaaacaatttcaaacaatgcagtttct
agaaaaccacattcaaaagatttagattttgaaaaactttataaagtggatgatgttgta
atgggtaaagtagaaagaattgttgactttggtgcttttgttgccttaccaaaaggtgga
gaaggactacttcatatttctaaaatatctaaacaaagagtaaaaaatgtttctgatgtt
ttaagtgttgcagatgaaatagaaataaaagtacttaaagttacaaaagacagaattgaa
ttagcttctaattcaatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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