KEGG   Alteromonas naphthalenivorans: ambt_11400
Entry
ambt_11400        CDS       T01513                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
alt  Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:alt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:alt03016]
    ambt_11400
Enzymes [BR:alt01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     ambt_11400
Transfer RNA biogenesis [BR:alt03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    ambt_11400
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: AEF03801
UniProt: F5ZD39
Position
2545598..2547031
AA seq 477 aa
MTKKLYIKTWGCQMNEYDSEKMADLLDSTHGYSAAETAEEADVILLNTCSIREKAQEKVF
HQLGRWKNLKQDKPELIIGVGGCVASQEGSVIRQRAPYVDLVFGPQTLHRLPEMINQLKG
GEKSVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPVDD
VLLEIAQLAGQGVREVNLLGQNVNAFRGENHDGTVCRFAELLELVAAIDGIDRIRYTTSH
PVEFTDDIIDVYATIPELVDHLHLPVQSGSDRILNLMKRGHTAIEYKSKIRKLRKVRPNI
SMSSDFIIGFPGETDADFEATMDLIQAIDYDLSFSFIYSARPGTPAADAVDDVTEDAKKQ
RLYLLQQRINQQALRIARNMVGTEQRILVEGPSKKNPMELSGRTENNRVVNFEGTPDMIG
EFVDVEVTDVFSNSLRGDVIRREDEMGLRVAVSPQSIMAKHEADLPDAIGVGQFNPA
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgactaaaaagctgtatatcaaaacctggggctgccaaatgaacgagtacgactcggag
aaaatggcagacttactcgactctactcatggctactctgcagcagaaactgcggaagaa
gccgatgttatcttgcttaatacgtgctctattcgtgagaaggcgcaggaaaaagtgttc
caccagcttggtcgttggaagaaccttaagcaagataaacccgagcttattattggcgtg
ggcggttgcgtagcttctcaagaaggtagcgttattcgtcagcgcgccccttatgttgat
ttagttttcggcccgcaaaccttgcatcgtttgcccgaaatgattaaccaacttaaaggc
ggtgaaaagtcggttatcgacgtaagcttccctgaaattgaaaaattcgaccgtttacct
gaaccccgtgctgaaggcccaacggcgtttgtttctattatggaaggctgctctaagtac
tgcacattctgcgtagtaccttatacccgtggtgaagaagtaagccgtccggtagacgac
gtattacttgaaattgcccagctagccggtcaaggtgtacgcgaagttaacttgttaggc
cagaacgtaaacgcgtttcgcggtgagaaccacgatggaaccgtatgtcgctttgccgag
ttattagaacttgttgcagctattgatggtatagacagaattcgttataccacgtcgcat
ccggttgaatttaccgatgatattatcgacgtgtacgccactattcctgagcttgttgat
cacctgcatttgcctgtgcaaagtggttcagaccgtattcttaacttaatgaagcgtggt
cataccgccattgagtataagtccaagattcgtaagcttcgtaaagttcgcccaaacatt
agtatgtcgagcgacttcattattggtttcccaggtgaaaccgatgctgactttgaagcc
acaatggaccttattcaggccattgattacgacctaagctttagctttatttatagtgct
cgccctggtacacccgcggcagatgcagtagatgatgtaaccgaagacgccaagaagcag
cgtttataccttttacagcaacgtatcaaccaacaagcattgcgtattgcgcgtaacatg
gtaggtactgaacaacgtattttggtagaaggcccgtcaaagaaaaatcctatggagctt
tctggccgtactgaaaataaccgcgtggttaacttcgaaggtacgccggatatgattggt
gaattcgtagacgtggaagtgacagacgtattctctaattcattacgtggtgatgttatt
cgccgtgaagatgaaatgggcttgcgtgttgctgtttcgccccaatctattatggccaag
cacgaggctgacttgcctgacgcgataggcgtaggccagttcaacccagcataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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