KEGG   Alteromonas naphthalenivorans: ambt_12120
Entry
ambt_12120        CDS       T01513                                 
Name
(GenBank) Holliday junction DNA helicase motor protein
  KO
K03550  holliday junction DNA helicase RuvA
Organism
alt  Alteromonas naphthalenivorans
Pathway
alt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ambt_12120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alt03400]
    ambt_12120
DNA repair and recombination proteins [BR:alt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ambt_12120
    RecFOR pathway proteins
     ambt_12120
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH RecR_HhH Transposase_20 HHH_3 IMS_HHH HHH_2 DUF3173 PG_binding_2 HHH_8
Other DBs
NCBI-ProteinID: AEF03944
UniProt: F5ZDI2
Position
complement(2713612..2714232)
AA seq 206 aa
MIGRIRGTLAEKQPPEILVDANGVGYEIHMPMTSFYQLPAVGEEVVVYTHFVVREDAQLL
FGFADKMERGLFRELIKANGVGPKLGLTILSGMSAGQFLSAVQNADVSALVSLPGIGKKT
AERLVVELKDRLAKFGKVQSIAIPPPSGDLLNTNTLVEVNDTREDAQSALVALGYKPAQA
SKLIDSVYKEGMESESLIREALKAAI
NT seq 621 nt   +upstreamnt  +downstreamnt
atgattggacgtattcgcggtacattagccgaaaagcagcccccagaaatattggtagat
gcaaatggggtaggttatgaaattcatatgccaatgaccagcttctatcaattaccagcg
gtaggtgaggaagtggtggtttatacccatttcgtcgtgcgagaagacgcgcaattatta
tttggttttgccgataaaatggagcgaggattattccgagagctaattaaagcaaacggt
gtgggccctaaattaggcttaaccatattatcgggtatgtccgcaggccaatttttgtca
gcggttcaaaatgcagatgtttcggcactagtaagtttaccgggtattggtaagaaaacc
gctgaaaggttagtggttgagttaaaagataggttagcgaagtttggcaaagtgcaaagt
attgctattccaccgccaagtggtgatttacttaataccaatacgttagtagaagtaaac
gatacgagagaagatgcccagagcgcgctagtggcactaggctataagcctgcgcaggcc
agtaaacttatcgatagtgtgtataaagaaggcatggaaagcgaatcgcttatacgtgaa
gcgttaaaagccgctatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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