KEGG   Alteromonas naphthalenivorans: ambt_12135
Entry
ambt_12135        CDS       T01513                                 
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
alt  Alteromonas naphthalenivorans
Pathway
alt00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:alt00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    ambt_12135 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:alt01007]
    ambt_12135 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:alt03016]
    ambt_12135 (aspS)
   03029 Mitochondrial biogenesis [BR:alt03029]
    ambt_12135 (aspS)
Enzymes [BR:alt01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     ambt_12135 (aspS)
Amino acid related enzymes [BR:alt01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   ambt_12135 (aspS)
Transfer RNA biogenesis [BR:alt03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    ambt_12135 (aspS)
 Prokaryotic type
   Other AARSs
    ambt_12135 (aspS)
Mitochondrial biogenesis [BR:alt03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    ambt_12135 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AEF03947
UniProt: F5ZDI5
Position
complement(2715324..2717084)
AA seq 586 aa
MRTDYCGNIDSSYIGQEITLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVA
NKLRGEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEIINRSDALPLDWNQENSEEQ
RLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEGEGFLDIETPILTKATPEGARDYLVPS
RTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFLD
ADGVMAITESMIRDLFSTMLNVDLGDFPRMTYAEAMKRFGSDKPDLRNPLELTDIADLLE
TVEFKVFSGPANDPKGRVAAIRVPGGASMSRKQIDEYTKFVGIYGAKGLAWMKVNEMAPG
QEGLQSPILKFLSEDITDGILQRTGAQAGDILLFGADTNTVVTEAMGALRLKLGEDFELL
EGEWKPLWVVDFPMFEEFDGQLHAIHHPFTALRGLTAEELKANPVGALSDAYDMVLNGCE
LGGGSVRIHNEEMQSAVFEILGIEEEEAKNKFGFLLDALRFGAPPHAGLAFGLDRLVMLM
TGASSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKPS
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgcgcacagattactgtgggaacatcgattcatcatacattgggcaagaaatcacccta
tgtggttgggtaaacaaacgccgtgatttaggtggcgttatcttcatcgacttacgagac
cgcgaaggtatcgttcaagtggtattcgaccctgatttaccagaggtattaagcgtagcg
aataaacttcgcggtgaattctgcgtgaaacttactggtaaagttcgtgctcgcccagaa
ggtcaaattaataaagatatgcgtaccggcgaaattgaaattttgggcacaggcctagaa
atcatcaatcgttctgatgcgcttccacttgattggaaccaagagaactctgaagagcag
cgtttacgctaccgctaccttgatttacgtcgccctgttatgagccagcgcttgcagttt
cgcgctaaggtaactggggcagtacgtcgtttcttagaaggcgaaggctttctagatatt
gaaacccctatattgaccaaagcgacacctgaaggtgctcgtgattatttagtacctagc
cgtacgcataaaggcgagttctttgcactgccgcaatcgccacaattgtttaagcaattg
ctgatgatgtctggcatggaccgatactatcaaatcgtaaaatgcttccgtgacgaagat
ttacgtgccgatcgccaaccagaatttactcaaatcgatatcgaaactacgtttctagat
gccgatggcgtaatggcgattaccgaaagcatgatccgcgatttattcagcactatgttg
aacgtagatttaggtgacttcccacgcatgacctacgccgaagcaatgaagcgttttggt
agcgataagcctgatttacgtaatccactagagcttaccgatattgctgacttacttgaa
actgttgagtttaaagtattcagtggccctgcgaacgatcctaaaggtcgtgttgctgct
attcgcgtacctggcggtgcgagcatgtctcgtaagcaaattgacgagtacactaagttt
gttggcatatatggcgcgaagggcttagcctggatgaaagtgaacgaaatggcacctggc
caagaaggtttacaatcacctattcttaagttcttaagcgaagatattaccgacggtatt
ttgcagcgcactggcgctcaagctggcgacatcttgttattcggtgccgacactaacaca
gtagttaccgaagctatgggcgcacttcgccttaagctaggtgaagactttgaactctta
gaaggtgagtggaagccgttgtgggttgtcgacttccctatgtttgaagaattcgatgga
cagcttcatgctatacaccatccgtttactgcacttcgcggcttaaccgcagaagagctt
aaagcaaacccggttggcgcattgtctgatgcctacgatatggtattaaatggttgcgag
cttggtggtggttcagtacgtattcacaacgaagaaatgcaatctgccgtgtttgagatt
ttgggtattgaagaagaagaagcgaagaataaatttggcttcttacttgatgcgttacgc
tttggtgcgccgcctcacgcaggtctagcgttcggtttagatcgccttgttatgcttatg
acaggtgctagttctattcgagatgtaatggcattccctaagaccacgacagcggcttgc
ccattaacatctgcgccaagtccagcgaatccacagcagttggaagagttggcgattgca
acggtaaaaaagccgtcgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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