KEGG T01513: ambt

Alteromonas sp. SN2: ambt_17095

Entry

ambt_17095 CDS T01513

Gene name

lacZ

Definition

beta-D-galactosidase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

alt Alteromonas sp. SN2

Pathway

alt00052	Galactose metabolism
alt00511	Other glycan degradation
alt00600	Sphingolipid metabolism
alt01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:alt00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:alt00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:alt00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 Glyco_hydro_72

Other DBs

NCBI-GI:

333894851

NCBI-GeneID:

10650334

UniProt:

F5Z5J8

Position

complement(3857467..3860649)

AA seq 1060 aa
MANVAQVVAQKDWQNPVVFQRNRVNGHSPLNGFLTQEDAKHNANAQKQSLNGEWDFRLYP
QPEAVTEDLLSEVLSDALPEAANWQSITVPSNWQMQGFDKPIYCNVKYPFPVNPPEVPSD
NPTGCYRKTFTVSEEAVQLRNHIVFEGVNSAFHLWCNGEYVGYSQDSRLPAEFNLTPFLK
VGENRLAVMVIRWSDGSYLEDQDMWWLSGIFRDVVLVTKPQHHIQDVFATPKLDACYRDG
SLEVRTAINAPASYTVGIQLFDGETAVTEQAVSGTNNRRIDEKGGWDDVIFQSLAVTEPN
KWTAETPYLYRLVVTLFNDAGDVVVAEGYNIGFRQVDMLDGQLCVNGKPILIRGVNRHEH
HESKGHAVNEADMIEDIKLLKQNNFNAVRTAHYPNHPRWYELCDEYGLYLVDEANIETHG
MFPMGRLSRDALWAGAYLARYTQMVERDKNHASIIIWSLGNECGHGPNQDAMYGWSKAFD
PSRPVQYEGGGANTTATDIIAPMYARVDTDVLDDAVPKWAIKKWLSLPGETRPVILCEYA
HAMGNSLGSFADYWQAFKDYPRLQGGFIWDWVDQGLVKHTDSGEAYWAYGGDFGDADNDR
QFCINGLLFPDRTPHPALFEAKYCQQHLAFTLKSLQNEQAGSYQLTIASDYVFRSTDNEA
LQWQLLENGECVANGSETLSIGPQSSQTLVITPSIEFVPDATYHLNIDVVLRNDCDWANA
GHVLDTEQFEIANTAGFSGLTAADFSPLASASTHTGDASNSENKDKAKQKVTVERTETQV
NIHAASNHFVLDANTGLLTSWLANGEEQLSAPLEDNFFRAPLDNDIGVSEVDNPDPNAWE
SRWRRAGIGQWQRSCVDVDIVECAHDVRVTALFNYHYNNALVAATSWCYRVDATGTLALD
VQVKLADTLPPMPRIGLQWAVPHSSQTEANIQWKGLGPFENYPDRLAAARFGSYSESIAS
MHTPYIFPTDNGLRSDCRELSINAVKVAGDFHFAVSPYGQKQLDEAKHTCDLTTADSTHV
YVDHAHMGVGGDDSWSPSTHKAFLLEKKAYRYFLSFTACS

NT seq 3183 nt +upstreamnt +downstreamnt
atggcaaatgttgctcaagttgttgcgcaaaaagattggcaaaaccctgtcgtatttcaa
agaaatcgcgtgaatggacatagtccattaaacggttttttaactcaagaagatgctaaa
cataacgctaatgcgcaaaaacaaagtttgaatggcgagtgggattttagattatatccc
caacctgaggccgttacagaagacttactgagcgaggtattgtctgacgcactgcctgaa
gctgcaaactggcagtctattaccgtgccttcaaactggcaaatgcaggggtttgataag
cctatttactgcaatgttaaatatccttttccggtaaacccgccagaagtacctagcgat
aaccccacaggctgctaccgcaaaacgtttacggtaagcgaagaagcagtacagctgcgt
aatcatattgtgtttgaaggggttaatagtgcctttcatctttggtgcaatggcgaatat
gtggggtattcgcaagatagccgtttaccggccgaattcaatttaacgccttttttaaag
gttggtgaaaatcgcttagcggtaatggttattcgctggtctgacggaagttatttagaa
gatcaagacatgtggtggttaagcggtatattccgcgatgtggtattggtaacgaaacct
cagcatcatattcaagatgtgtttgctacgccaaagcttgatgcttgttatcgggatggc
agcttagaagtgcgtaccgcgattaatgcaccagcaagctataccgtgggaattcagtta
tttgatggtgaaaccgccgttaccgaacaagcagtgtcaggcaccaacaaccgccgtata
gatgagaaaggcgggtgggatgatgtgatttttcaatcgctagcggttacagaaccaaat
aaatggacggccgagactccttatttgtatcgcctagttgtcactttgtttaacgacgca
ggtgatgtggttgttgccgaaggctacaacataggttttcgtcaggtagatatgcttgat
ggccagttgtgcgtgaacggaaagcctattcttattcgtggtgtaaatagacacgagcat
catgaaagcaaaggtcatgcggtaaatgaagccgacatgattgaagatataaagctttta
aagcaaaacaacttcaatgcggtacgcaccgcccactatcccaatcatccacgttggtac
gaactgtgtgatgaatatgggttgtacttagtagatgaagccaatattgaaacccacggt
atgtttccgatggggcgactctctagagatgcattgtgggcaggggcttatttagcccgc
tacacccaaatggtagagcgggacaaaaaccacgcttctattattatttggtcattaggt
aatgaatgtggtcatgggccaaaccaagatgctatgtacggttggtctaaagcctttgac
ccttcacgacctgtgcaatacgaaggtggtggggcgaatactaccgctaccgatattatc
gcgcctatgtatgcccgagtagatactgatgtacttgatgatgccgtacctaaatgggcc
attaaaaaatggttatcgctaccgggtgaaacccgccctgttattttgtgtgagtacgct
catgcgatggggaacagtttaggaagctttgcggactactggcaggcatttaaagactat
ccacgtttgcaaggtggcttcatttgggattgggtcgatcaaggcttagtgaagcataca
gacagcggtgaggcctattgggcctacggaggcgactttggtgatgccgataacgaccgt
cagttctgtattaatggtttgctgtttcctgatcgcacgccgcaccctgctttatttgaa
gctaaatactgccaacagcatttagcattcacgcttaaatctttacagaacgaacaagct
ggcagttaccagttaaccatcgcaagcgactatgtatttcgctcaaccgataacgaagca
ctgcaatggcaattgctcgaaaacggagagtgcgttgctaacggctctgaaacattaagt
attggcccccagtcgtcacaaacacttgtgataaccccaagcattgagtttgtgcccgat
gcgacgtaccaccttaatattgatgtggtgcttagaaatgattgtgactgggcgaatgct
gggcatgtattagatacagagcagttcgagattgccaatactgcaggtttttctggactg
acagccgcagatttttctcctttagcatcagccagtacgcatactggtgacgctagtaat
agcgagaataaagacaaagctaaacaaaaagtaacggtagagcgcaccgaaactcaggtg
aatattcacgcggcaagtaatcacttcgtgcttgatgctaacactgggttacttacttct
tggttagccaatggcgaagagcagcttagtgcaccacttgaagataacttcttcagggca
ccgttagataatgatattggcgtaagtgaagtggataaccccgatccaaatgcatgggag
tcgcgctggcgccgcgctggaataggccagtggcaacgcagctgtgttgatgtcgatatt
gtagaatgtgcacacgatgtacgtgttacggcactgtttaactaccactacaacaatgcg
ctagtcgctgctacaagttggtgttaccgcgtagatgcaacaggtacattagcattagat
gttcaggttaagttagccgatacattgccacctatgccgcgtatcggtttgcagtgggca
gtgcctcactcaagtcagactgaagctaacattcagtggaaggggttagggccatttgaa
aattatccagaccgattagcagcagcaaggtttggtagttacagtgaaagtattgcaagt
atgcatacgccttacatctttcctaccgacaatgggcttcgtagtgattgtcgagagctt
agtattaacgctgtaaaagtagcgggtgattttcactttgctgtaagcccgtacgggcaa
aagcagcttgatgaagctaagcacacctgcgacttaactactgcagacagtactcacgtg
tacgtcgaccatgcccacatgggggtaggcggcgatgactcgtggagcccaagtacgcac
aaggcctttttgttagagaaaaaagcctatcggtattttttatcttttactgcatgctca
taa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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