KEGG   Alteromonas sp. SN2: ambt_18705Help
Entry
ambt_18705        CDS       T01513                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
alt  Alteromonas sp. SN2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:alt00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    ambt_18705
Enzymes [BR:alt01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     ambt_18705
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     ambt_18705
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4191760..4192569)
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRLGVSPYLLNETIDNIIVRERRMRWPVPEDVALAIGQKVIAVKRRAKYLM
IETEAGTLILHLGMSGKLRVIDASTPVAKHDHVDIVMATGKCLRFNDPRRFGAFLWQPPG
EALKLLANLGPEPLTDDFDDRRLFTLSRGKKSTVKNFIMDNAVVVGVGNIYANEALFLAG
IDPRREAGKVSSTRYKNLTQIIKQVLAKAIEQGGTTLKDFAQTDGNPGYFAQHLNVYGRK
GEPCEVCKTEIQSKVIGQRNTFFCKQCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttaccagaagttgaagtaagccgtttaggcgtttccccctatctgttaaac
gaaacgatagataatattattgtacgcgaacgcagaatgcgttggcctgttcccgaggat
gtggcgctagctatcggtcaaaaagtgatagccgttaagcgtagagcaaagtacctcatg
atcgaaaccgaagcgggcacgcttattttgcatttaggtatgtcgggtaagttgcgagtt
attgatgcgtctacacctgttgcgaaacacgatcatgtggatatcgtgatggctacgggg
aaatgtttacgttttaacgaccctaggcgttttggggccttcttatggcaaccacctggg
gaagcgttgaagttacttgctaaccttgggccagagccattaactgacgatttcgatgat
aggcgtttgttcacgctctcgagaggcaaaaaaagtacagtaaaaaacttcatcatggat
aatgctgttgtggtgggcgtagggaatatttatgccaacgaagctttatttttagcgggt
atcgacccaagaagagaagcaggaaaagtcagcagcacccgctataaaaaccttacgcaa
atcatcaagcaggttttagcaaaagcgatagaacaaggcggcactacattaaaagatttt
gcgcaaaccgatggtaacccaggctactttgcacagcatttaaatgtgtatggaagaaaa
ggggagccgtgtgaggtatgtaaaacagaaatacaaagtaaagtgattggccagcgaaat
acattcttttgtaaacagtgtcagcgctag

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