KEGG   Alteromonas naphthalenivorans: ambt_21010
Entry
ambt_21010        CDS       T01513                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
alt  Alteromonas naphthalenivorans
Pathway
alt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ambt_21010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alt03019]
    ambt_21010
   03110 Chaperones and folding catalysts [BR:alt03110]
    ambt_21010
   03029 Mitochondrial biogenesis [BR:alt03029]
    ambt_21010
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:alt04147]
    ambt_21010
Enzymes [BR:alt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     ambt_21010
Messenger RNA biogenesis [BR:alt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ambt_21010
Chaperones and folding catalysts [BR:alt03110]
 Heat shock proteins
  HSP60 / Chaperonin
   ambt_21010
Mitochondrial biogenesis [BR:alt03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    ambt_21010
Exosome [BR:alt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   ambt_21010
  Exosomal proteins of other body fluids (saliva and urine)
   ambt_21010
  Exosomal proteins of breast cancer cells
   ambt_21010
  Exosomal proteins of colorectal cancer cells
   ambt_21010
  Exosomal proteins of bladder cancer cells
   ambt_21010
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AEF05693
UniProt: F5Z730
Position
complement(4713355..4714995)
AA seq 546 aa
MAAKEVRFGNDARTKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIITEGHKSVAAGMNPMDLKRGI
DKAVIAAVEELKALSTDCADSKSIAQVGTISANSDAEVGDIIAQAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDSPFILLVDKKISNIRELLPTLEGV
AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVELEDLGTAKRVVINKDNTTIVDGNGDEEAIEGRCAQIKGQIEDSSSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKLASLTGENEDQTVGIKLALRAMEAPLRQIASNAGAEASVVVNEVKNGDGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIADIPQDEAAPAMPDMGGMG
GMGGMM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcagctaaagaagtacgttttggtaacgacgctcgtacaaaaatgcttaaaggcgta
aacacgctagcaaacgcagtgaaagttacactaggtcctaaaggccgtaacgtagtacta
gataagtctttcggcgctcctaccatcactaaagatggtgtatctgtagccaaagaaatc
gaacttgaagacaagtttgagaacatgggcgcgcagatggttaaagaagttgcgtctaaa
gcgaatgacgaagcgggtgacggtacaactactgcaactgttttagcacaagctattatc
actgaaggtcacaagtctgttgctgcaggcatgaacccaatggatcttaagcgtggtatc
gacaaagcagttattgctgcggttgaagagcttaaagccctatctactgattgtgctgac
agcaagtcaattgctcaggttggtactatctctgcaaactctgatgcagaagttggcgac
atcattgctcaagcaatggaaaaagtaggtaaggaaggcgtaattactgttgaagaaggt
caagcacttcaaaacgaacttgacgttgttgaaggtatgcagttcgaccgcggttaccta
tctccttacttcattaacaaccaagagaacggcactgttgaactagacagccctttcatc
ctattggttgataagaaaatttctaacatccgtgagttgcttcctacccttgaaggcgta
gcaaaagcaggtaagccactgatgattattgctgaagatgttgaaggcgaagccttagct
acactagtagtaaacaacatgcgcggtattgttaaagttgctgctgttaaagcacctggc
tttggtgaccgtcgtaaagcaatgcttcaagacatcgctattcttactggtggtacggtt
atctctgaagagattggtctagaccttgaaaaagtagagctagaagaccttggtaccgct
aagcgcgtagttatcaacaaagacaatactactattgttgatggtaacggcgacgaagaa
gcgatagaaggccgttgtgctcaaattaaaggtcaaattgaagactcttcttcagactac
gacaaagaaaagcttcaagagcgtttagctaagctttctggcggtgttgcagtaattaaa
gttggtgctgctaccgaagtagaaatgaaagagaagaaagaccgcgttgaagatgcactt
catgcaactcgcgccgcggttgaagaaggcgtagtacctggtggtggtgtggcgctagtt
cgtgcagcagctaagcttgctagcctaactggcgaaaacgaagaccaaactgtaggtatt
aagcttgcactacgtgcaatggaagcgcctttacgtcaaatcgctagcaacgccggtgca
gaagcatctgttgtggttaacgaagtgaaaaatggcgacggtaactacggttacaatgcg
ggcaacgacacgtacggcgacatgctagagatgggtattcttgacccaactaaagtaacg
cgctctgcactacagttcgcagcatcaatcgcttcacttatgattacaactgaagccatg
attgcagatatacctcaagacgaagcagcgcctgcaatgcctgatatgggcggcatgggt
ggaatgggcggcatgatgtaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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