KEGG   Allochromatium vinosum: Alvin_0166
Entry
Alvin_0166        CDS       T01168                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
alv  Allochromatium vinosum
Pathway
alv03030  DNA replication
alv03430  Mismatch repair
alv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Alvin_0166
   03430 Mismatch repair
    Alvin_0166
   03440 Homologous recombination
    Alvin_0166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alv03032]
    Alvin_0166
   03400 DNA repair and recombination proteins [BR:alv03400]
    Alvin_0166
Enzymes [BR:alv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Alvin_0166
DNA replication proteins [BR:alv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Alvin_0166
DNA repair and recombination proteins [BR:alv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Alvin_0166
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: ADC61135
UniProt: D3RVK8
Position
complement(176028..176705)
AA seq 225 aa
MPILTDWGRRWRHRRAPPGPLRDYLAQPLPSPRADYREVEYLAIDLETTGLDQRQDLILS
VGYVVLHGPEIDLSTARHHLVRIDRSIPEASAVIHQITDDQAATGRELEDVLGEVLAALT
GRVMIAHHAGIEQGFLSQACQRCWGRGLPLRLVDTQTLAHRTLERRQIPFKASDLRLHAL
TSRYNLPRHGAHNALSDALSAAELFLAQAAYRDDGRRLRLSEFLC
NT seq 678 nt   +upstreamnt  +downstreamnt
atgccgatcctgaccgactggggccgacgctggcgccacaggcgcgccccgcccggcccg
ttgcgcgattatctggcccagcccctgccgagcccacgtgccgactatcgcgaagtcgag
tatctggccatcgacctggagacgaccggactcgatcagcgtcaggatctgatcctgagc
gtcggctatgtggtgctccatggtccggagatcgatctgtcgaccgcgcgccatcatctg
gtgcgtatcgaccgctccatccccgaggcgagcgccgtgatccaccagatcaccgacgat
caggccgccaccgggcgcgagctggaggatgtcctgggtgaagtgctcgcggcgctcacc
ggacgggtgatgatcgcccaccatgccggcatcgagcagggctttctgtcgcaggcctgc
cagcgctgctggggccgggggctgccgctgcgcctcgtcgatacccagaccctggctcat
cgcacgctggagcgacgccagatcccgttcaaagcctcggacctgcgtctgcacgcgctc
accagccgctacaacctgccgcgccacggcgctcacaacgccctgagcgatgcgctctcg
gccgccgaactgttcctggcccaggcggcctatcgcgacgacggacggcggttacgcctg
tcggaatttttgtgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system