KEGG   Allochromatium vinosum: Alvin_0780Help
Entry
Alvin_0780        CDS       T01168                                 

Definition
RNA polymerase sigma-70 subunit RpoD subfamily
Orthology
K03087  
RNA polymerase nonessential primary-like sigma factor
Organism
alv  Allochromatium vinosum
Class
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
905056..906072
Genome map
AA seq 338 aa AA seqDB search
MSSAKDRETPDNLSEIDSESLPLLDGDSDSVASDDSDSEDLKLLDGDSSSVTGERPIEAS
EADFDATRIYLNEIGESRLLTAEEEIRFARLAQAGDNAARQRMIVCNLRLVVKIARRYLN
RGLPLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTVRLPIHV
VKEINIYLKASRQLAQSLDHDPTSEDIAQLLDRPINEVKRMLGLNERITSVDTPYSKDAD
KPLVDMLQDDGSSDPTERIQDDDIHVNIEHWLGLLNDKQREVVERRFGLHGHENSTLESV
ARELGVTRERVRQIQMDALRRLRDILESEGFSVESFFK
NT seq 1017 nt NT seq  +upstreamnt  +downstreamnt
atgtcgagcgccaaagaccgcgagacccctgacaatctgtctgagatcgatagcgaatcc
ttgccgctgttggatggggattcggactccgtcgcttccgatgactccgactcggaggat
ctcaagctgctcgacggcgactcgtcgagcgttactggggagcgccctatcgaggcatcc
gaggccgatttcgatgccacccggatctatctcaacgagatcggtgagtccaggctcctg
accgccgaggaggagatccggttcgcccgcctcgcccaggccggcgacaacgcggcgcgt
cagcgcatgatcgtgtgcaacctgcggctggtggtcaagatcgcgcgccgctatctcaat
cgcggtctgccgctgctggatctgatcgaggaaggcaatctcgggctgatccgggcggtc
gagaagttcgaccctgagcgcggctttcgcttctcgacctatgcgacctggtggatccgc
cagaccatcgagcgcgccatcatgaaccagacgcgcacggtgcgcctgcccatccatgtg
gtcaaggagatcaacatctatctcaaggcctcgcgccagctcgcgcagagcctggaccac
gacccgacctccgaggacatcgcccagctgctcgaccgtccgatcaacgaggtcaaacgg
atgctgggtctcaacgagcgcatcacctcggtcgacacgccctacagcaaggacgccgac
aagcccctggtcgacatgctccaggacgacggttccagcgaccccaccgagcgcatccag
gacgacgacatccacgtcaacatcgagcactggctcggtctgctcaacgacaagcagcgc
gaggtggtcgagcgccgtttcggtctgcacggccatgagaactcgacgctcgaaagtgtc
gcgcgcgagctgggcgtcacccgcgaacgtgtgcgtcagatccagatggacgcgctgcgc
cggctgcgtgatatcctcgaaagcgaagggttttcggtcgagtctttcttcaaataa

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