KEGG T01168: Alvin

Allochromatium vinosum: Alvin_1505

Entry

Alvin_1505 CDS T01168

Definition

succinyl-CoA synthetase subunit beta (EC:6.2.1.5)

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

alv Allochromatium vinosum

Pathway

alv00020	Citrate cycle (TCA cycle)
alv00640	Propanoate metabolism
alv00660	C5-Branched dibasic acid metabolism
alv01100	Metabolic pathways
alv01110	Biosynthesis of secondary metabolites
alv01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:alv00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:alv00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:alv00660]

SSDB

Motif

Pfam:

ATP-grasp_2 Ligase_CoA ATP-grasp_5 ATP-grasp_4

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1745388..1746596

AA seq 402 aa
MNLHEFQAKQLLRERGLAVPDGVLVERPEAARDACVQLGGTRWAVKAQIHSGGRGKAGGV
VLVDSPEQAESETRRLLGSRLVTLQSGPDGLPVGSVLIERPTAIARELYLSLLVDRASER
LLFVASAAGGMDIETVAAETPERILKVALHPVVGFQPYKARRLGFGLGLDESQIKALGTL
MDGLYRLFVDTDASLIEINPLVVTDTGELLALDAKITLDDNALMRHPALAALRDPSQEDP
REAAARAHDLNYISLDGNIGCMVNGAGLAMATMDLIKLQGGRPANFLDVGGGATAARVAE
AFKLILSDPKVASILVNIFGGIVRCDLIAEGIIQAVREVGVSVPIVVRLEGTNAPQGLQL
LADSGLALQTAGELDAAATLAVEAARRGIGASSNTVEEEGRP

NT seq 1209 nt +upstreamnt +downstreamnt
atgaacttacacgaatttcaagccaaacagttgttgcgggagcgcggactcgcggtcccg
gatggagtcctggtcgagcgtcccgaggccgcacgcgacgcctgcgttcagctcggcggc
acgcgctgggcggtcaaggcgcagatccacagcggcggtcgcggcaaggctgggggcgta
gtgctggtcgacagtcccgagcaggccgagagcgagacgcgccgtctgctcggctcacgg
ctcgtcacgctccagagcgggccggacgggctgccggtcggatcagtcctgatcgaacgc
ccgaccgccatcgcgcgcgagctctatctgagtctgctggtcgatcgcgccagcgagcgg
ttgctgttcgtcgcctcggcggccggcggcatggacatcgagacggtggcggccgaaacg
cccgagcggattctcaaggtcgcgctgcatccggtggtcggcttccagccttacaaggcg
cgccggctcggcttcgggctgggattggacgaaagccagatcaaggcgctcggtacgctg
atggatggactctatcggctcttcgtcgacacggacgccagcctgatcgagatcaatccg
ctggtcgtcaccgacacgggcgagctgctggcgctcgatgccaagatcacgctcgacgac
aacgcgctcatgcgtcatccggcactggccgcactccgcgacccgagtcaggaagacccg
cgcgaggcggcggcgcgggcgcacgatctcaactacatcagtctcgacggcaacatcggc
tgtatggtcaatggggctgggctggcgatggcgaccatggatctgatcaagctccagggc
ggacggccggccaacttcctcgatgtcggcggcggggcgacggcggcgcgcgtggccgag
gcgttcaagctcattctctccgaccccaaggtcgcctcgatcctggtcaacatcttcggc
ggtatcgtgcgctgtgacctgatcgccgaggggatcatccaggcggtgcgcgaggttggg
gtgtcggtgccgatcgtggtgcgcctggaaggcaccaatgcgccgcaggggttgcaactg
ctcgccgacagcgggctggcgcttcagacggccggcgaactcgacgcggccgcgacactg
gcggtcgaagccgcgcggcgtggtatcggcgcatcatcgaacaccgtggaagaggagggc
cgcccatga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALV (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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