KEGG   Allochromatium vinosum: Alvin_3077Help
Entry
Alvin_3077        CDS       T01168                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
alv  Allochromatium vinosum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:alv00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Alvin_3077
Enzymes [BR:alv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Alvin_3077
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Alvin_3077
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3465473..3466306)
Genome map
AA seq 277 aa AA seqDB search
MPELPEVETTLRGIRPHLEGRRIARLIVRNPRLRQPIPPEMPERVAGQPIRSLRRRSKYL
LIGLEHGSLLVHLGMSGSLRVVTAESPLPPRTHDHLDLVLSDGGILRFHDPRRFGIFLWI
PMSPEIALVEHPLLCRLGPEPLENDFDGEHLYRSSRSRRVAVKSFIMDSAVVVGVGNIYA
SESLFLAGLHPARACNRIDQGGYGRLAETIRRVLRASIEQGGTTLRDFVNETGAPGYFAQ
SLRVYGRAGEPCRICGTRIEPQRIGQRSSFYCPRCQT
NT seq 834 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaggtcgagaccacgctgcgcggcatccggccccacttggaaggt
cgccggatcgcacgcctgatcgtgcgcaatccgcgtctgcgccaaccgatcccgcccgag
atgcccgaacgggtcgccggtcaaccgatccgctccctgagacggcggagcaaatatctg
ttgatcgggctggagcacggcagcctgctcgtgcatctgggcatgtcgggcagtctgcgc
gtcgtcacggccgagagtccactcccgccccgaacccacgatcatctcgatctggtgctc
tcggatggcggaatcctgcgttttcatgatccgcgccggttcgggatctttctctggata
ccgatgtcgcccgagatcgcgctcgtcgagcatccgctgttgtgcaggctgggaccggag
ccactggagaacgacttcgacggcgaacatctctatcgttcgagccgctcgcgccgggtc
gccgtcaagtcgttcatcatggactcggcggtcgtggtgggtgtcggcaatatctacgcc
agtgaatcgctgtttctcgccggcctccatccggcgcgcgcctgcaaccggatcgaccag
ggcggctatggacgcttggccgagacgatccgacgggtgctcagggcatccatcgaacag
ggcggcaccacgctgcgcgacttcgtcaacgagacaggtgctccgggctatttcgctcag
tcgctacgggtctatggacgcgcgggcgaaccctgccggatctgcggcacacgcatcgag
ccgcagcggatcggacagcggtcgagcttctactgtccacgctgtcagacttga

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