KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_320010

Entry

ARALYDRAFT_320010 CDS T01578

Definition

pectinesterase family protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00040	Pentose and glucuronate interconversions
aly00500	Starch and sucrose metabolism
aly01100	Metabolic pathways

Module

aly_M00081

Pectin degradation

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:aly00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:aly00500]

SSDB

Motif

Pfam:

Pectinesterase

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 352 aa
MGLYKTKSKRSIANYYHIILINIFILSSITFSSMASSNSSSSSIDFSTAILIRVDQSGKG
DFSKIQEAIESIPPNLNNSQLYYIWVKPGIYREKVVIPADKPYITLSGTQASNTFLIWSD
GGDILESPTLTIFATDFVCRFLTIQNKLGTAGRAVALRVAADKAAFYGCVITSYQDTLLD
DNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPTKGSITAQMRTSATEKSGFIFLG
CKLTGSSSTYLGRPWGPYSRVIFAYSFFSNVVAPRGWNQWGDSTKENTVYYGEYKCYGPG
ADRGQRVKWSKQLSDDEATVFLSKDFIGGKDWLRPAPSHFKKWSQINPKIYK

NT seq 1059 nt +upstreamnt +downstreamnt
atgggtctttataaaacaaagtccaaacgttcaattgctaactattatcatatcatactc
atcaatattttcattctctcttcaatcacattttcatccatggcttcttctaattcttct
tcgtcttccattgatttttctactgcaattctaataagggttgatcaatcgggcaaagga
gacttcagtaagattcaagaagcaatagaatctatccctcccaatctaaacaactctcaa
ctctattacatttgggttaagcctggaatttaccgagaaaaggtggtgattcctgcggat
aaaccctacataacattgagtggaacacaagcttccaacacctttctcatatggagcgat
ggtggagacattttggaatcacccactctcacaatatttgccaccgatttcgtatgtcga
tttctcactattcagaataagcttggaacggcgggacgggcggttgcactgcgggtggca
gcggataaggcagcgttctatggatgcgtgataacatcgtaccaagacactctccttgac
gacaatggaaaccattacttcaagaactgctatattgaaggagccaccgatttcatttgt
ggaagcgcttcttctctctatgaaagatgtcatctacactcgttgtcaccgactaaaggg
tctataacggcgcaaatgagaacgtcggcgacggagaaatcagggtttatattcttggga
tgcaagttaaccggatccagttccacgtatttgggaaggccatggggaccttattctagg
gttatctttgcttattccttcttctccaatgtcgtcgcacctcgagggtggaaccaatgg
ggagattcaaccaaagaaaataccgtatattatggtgaatacaaatgttacggtcccgga
gcagacaggggacaaagagtaaaatggtcaaaacaattatccgacgacgaagctaccgtc
ttcttgagcaaggactttatcggcggcaaagactggctccgacctgccccttcccacttc
aaaaaatggtcccaaataaacccgaaaatatataaataa

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

Download RDF

DBGET integrated database retrieval system