KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_343571

Entry

ARALYDRAFT_343571 CDS T01578

Definition

hypothetical protein

Orthology

K12117

LOV kelch protein 2

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Brite

Ubiquitin system [BR:aly04121]
Ubiquitin ligases (E3)
  multi subunit Ring-finger type E3
   SCF complex
    target recognizing subunit (F-box)
     ARALYDRAFT_343571

SSDB

Motif

Pfam:

Kelch_4 Kelch_3 Kelch_5 Kelch_6 Kelch_2 Kelch_1 PAS_9 PAS F-box-like F-box PAS_3

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 607 aa
MEWDSDSDLSGGDEVAEDGWFGGDNGAIPFPVGSLPGTAPCGFVVSDALEPDNPIIYVNT
VFEIVTGYRAEEVIGRNCRFLQCRGPFAKRRHPNVDSTIVTKMRQCLENGIEFQGELLNF
RKDGSPLMNKLRLVPIREEDEITHFIGVLLFTDAKIDLAPSPDLSAKEIPRISRSFTSAL
PIGERNVSRGLCGIFELSDEVIAIKILSQLTPGDIASVGCVCRRLNELTKNDDVWRMVCQ
NTWGTEATRALESVPGAKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGN
RIVIFGGEGVNMQPMNDTFVLDLGSSSPEWKSVLVSSPPPGRWGHTLSCVNGSRLVVFGG
YGSHGLLNDVFLLDLDADPPSWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALL
SDTFLLDLSMDIPTWREIPVPWTPPSRLGHTLTVYGDRKILMFGGLAKNGSLRFRSNDVY
TMDLSEDEPSWRPVIGYGSSLPGGMAAPPPRLDHVAISLPGGRILIFGGSVAGLDSASQL
YLLDPTEEKPAWRILNVHGGPPRFAWGHTTCVVGGTRLVVLGGQTGEEWMLNEAHELLLA
TSTTAST

NT seq 1824 nt +upstreamnt +downstreamnt
atggagtgggatagtgattccgatctcagcgggggagatgaagtggcggaggatggatgg
ttcggcggagataacggagcgattccgtttccggtaggtagtcttcctggaacggcgccg
tgtggttttgtggtcagcgatgctcttgaacctgataaccctatcatttatgttaacact
gtttttgagattgttactggttatcgagctgaggaagttattggtcgaaattgccggttc
ttacaatgtagagggccatttgctaaaagaaggcatccaaatgtagattctacaattgtg
acgaagatgcggcaatgtctagaaaatggcatcgagtttcaaggcgagttgctcaacttt
cggaaagatggatctcccttgatgaacaagctgcgtctagtccctatccgtgaagaagac
gaaatcactcatttcataggcgttctcttattcacagatgcaaaaattgatcttgcccca
tctcctgatttatctgcaaaagaaattccaagaatatctcgctcatttacttctgcttta
ccaatcggagagcgtaatgtttctcgtggactttgtgggatattcgaactgagtgatgag
gtcatagctatcaagatattgtcacagttgactcctggtgatattgcatcggttggttgt
gtatgtcggcggctaaatgagttgacaaagaatgatgatgtatggagaatggtctgtcaa
aacacatggggtacagaggcaacacgtgctcttgagagtgttcctggtgcaaagaggatc
ggttgggtgcgactggcccgagagtttaccacacacgaagcaacagcatggaggaagttt
tcggttggaggtactgttgagccttcccggtgtaatttcagcgcatgtgcagttgggaac
aggattgttatctttggcggggaaggtgtaaatatgcagccgatgaatgatacatttgtg
ttggaccttggctcgagtagccccgagtggaaatccgttctggtcagctctcctccaccg
gggcgctggggtcacacactttcttgtgtcaatggatcccgtttagtagtgtttggaggt
tacgggagccacggattactcaacgatgtgttcttattagaccttgatgcagacccgcca
agctggagagaagtatccggattggcccctccaataccaagatcatggcacagttcgtgc
acacttgatggcactaagctgattgtatcaggtggctgtgctgattcaggagctctactc
agcgatacattcctgcttgacctgtcgatggatataccgacatggagggagataccagtt
ccatggacccctccatctcgcctcggacatactctaaccgtctatggtgaccgcaagatt
ctcatgtttggcggtcttgccaaaaacggttctctgagattccgctctaacgatgtatac
acgatggatcttagcgaggatgaaccgagttggagacctgtgattgggtatggatctagc
ctcccaggaggcatggcagctccaccaccaaggctggatcatgtggcaatcagccttccc
ggtggtcgaatcttgatctttggtggttcggttgcagggcttgactcggcttctcagctt
tatcttcttgatccaactgaggagaaaccggcatggagaatactgaatgttcatggaggt
ccgccaaggtttgcgtggggacacaccacttgtgtggtcggaggaactcggttggtcgtc
ttaggtggtcaaaccggtgaagagtggatgctaaatgaagctcatgaactattattagca
acgtctactactgcaagcacttga

All links

Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

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