KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_471294

Entry

ARALYDRAFT_471294 CDS T01578

Definition

hypothetical protein

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00260	Glycine, serine and threonine metabolism
aly00400	Phenylalanine, tyrosine and tryptophan biosynthesis
aly01100	Metabolic pathways
aly01110	Biosynthesis of secondary metabolites
aly01230	Biosynthesis of amino acids

Module

aly_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:aly00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aly00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 465 aa
MSSGKIQVRGQPLPRVPARNHHMTHLLVCDVSTKRYHREINAISRNRSPSLDSVPTRTDK
RQFLRGDGNGKFGRFGGKFVPETLMSRLIELEDEFNFVMSDHEFQEELTTSLRDYVGRET
PLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAMISRRLGCSRVVA
ATGAGQHGVATAAACAKLSLECTVFMGATDIEKQSFNVRSMKLLGAQVKSVEGTFKDASS
EAIRNWVENLYTTYYLSGTVVGPHPYPIIVREFQSVIGKETRRQANQLWGGKPDVLVACV
GSASNALGLFHEFVGDKDVRLVGIEAAGLGLDSGKHSATLAVGDVGVYHGSMSYLLQDDQ
GQILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGIIPALEA
SHALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDTLIQRGMPSSLC

NT seq 1398 nt +upstreamnt +downstreamnt
atgtcgtccggtaaaatccaggtacgagggcagccacttcctagggttccagcaagaaac
caccatatgacacacttgcttgtttgcgacgtttccacaaaacgctaccaccgtgaaatc
aacgcaatcagccgtaatagaagtccatcgttggattcggtcccaacaagaaccgacaag
aggcagtttcttcgtggtgacggcaacggtaaattcgggaggttcggtgggaagtttgta
ccggagacattgatgtctcgcctgatagaacttgaagacgaatttaattttgttatgagc
gatcacgaatttcaggaggagcttaccacatcgttaagagactacgtaggaagagaaacg
cctctctacttcgccgaacgtctaaccgaacactacaagaacatagttccaaccatcgaa
ggtggacctgagatatacctgaaacgggaagatcttagccactgtgggtctcacaaaatc
aataatgctctcgctcaggccatgatttcccggcggcttggttgcagccgtgtggtggcg
gccactggagccggacaacatggagtcgccacagcggctgcatgtgccaagctctccttg
gagtgtaccgttttcatgggagctactgatatagagaaacaatcctttaatgtacgttcc
atgaaactccttggtgctcaggtgaaatcagtggaaggaacattcaaagatgcaagttca
gaagctattcgaaactgggtcgaaaacctatataccacatactacttatcgggtactgtg
gtaggaccgcatccgtatccgataatagtacgtgagtttcaatctgtgatcgggaaagag
acaagaaggcaagccaatcaactctggggtggtaagcctgatgtattggtggcttgtgtg
ggaagtgcctccaacgcattgggtttgttccatgagtttgttggggataaggatgtgcgg
ttagtcggtatcgaggctgcggggctcggtctggattcggggaaacattcagctactttg
gccgttggagatgttggtgtataccatggttccatgagctatttattgcaagatgatcaa
ggacagatacttaaaccacactccgtaggagttgggttagagtatccaggagttggaccg
gagattagtttcatgaaagaaactggcagagccgagttctatacagcaacagacgaagaa
gccattcaagcgtgcatgcgattaagcagattggagggaataataccggcactggaagcg
tctcacgcgctcgcgttcctcgacaaactcgttcctactctgcgcgatggagccaaggtg
gtcgttaattgcagtggccgtggtgacaaagatttagatactctcatccaacgaggcatg
ccctcttctttgtgttga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

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