KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_472021

Entry

ARALYDRAFT_472021 CDS T01578

Gene name

AT_CDCKD_3

Definition

cyclin-dependent kinase D1_3

Orthology

K02202

cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly03022	Basal transcription factors
aly03420	Nucleotide excision repair

Module

aly_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:aly03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:aly03420]

SSDB

Motif

Pfam:

Pkinase Pkinase_Tyr Kinase-like

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 393 aa
MPEMEQPKKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALR
EIKMLKELKHPHIILLIDAFPHKENLHLVFEFMETDLEAVIRDSNIFLSPADIKSYLLMT
FKGLAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYRAP
ELLFGAKQYGAAVDVWAVGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDVT
KLPDYVEYQFVPAPSLRSLFPAVSEDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAP
TDPAKLPKPVHKQDGKSSYGKHEAITVLSPPRKLRRVMPERGRVDSLKAHVDKDQQAPMS
LDFTILAERPPNRPTITSADRSHLKRKLDLEFQ

NT seq 1182 nt +upstreamnt +downstreamnt
atgccggagatggagcagccaaagaaagttgctgataggtatctcaagcaagaggttctt
gggcaaggtacctatggagtcgtcttcaaggccactgatactaagacggaacaaactgta
gcaatcaagaagataaggcttggtaaacaaagggaaggtgtaaatattacagctctcagg
gaaatcaaaatgctcaaagagctcaagcatcctcatataattctgctcattgatgcattt
cctcacaaggaaaacttgcatcttgtctttgagttcatggagactgacctcgaagctgtc
atccgcgattccaacatattcctctcacccgccgacatcaaatcttacctcctaatgaca
tttaaaggacttgcttattgccacgataaatgggttttgcacagggatatgaagccaaat
aacttgttaataggagttgatggacaactgaagcttgcagattttggcttagcacgtata
tttggtagtccaaatcgtaaatttacccaccaggtgtttgctagatggtacagagcacca
gaacttttgtttggtgcaaaacaatatggtgctgcagttgatgtttgggccgttggctgc
atattcgccgaacttctactacgcagaccatttcttcagggaaacagtgatattgatcaa
ttaagcaaaatatttgctgcttttgggacaccaaaagcagatcagtggccggatgtaaca
aagcttccagattatgtagagtatcaatttgtccctgcaccgtctctacgttctttattc
ccagcagttagtgaagatgctctcgacttgttgtccaaaatgtttacctatgacccaaag
gccagaatttccataaagcaggctctagaacacagatacttcacttctgcacctgctcct
actgacccggctaagctcccaaagcccgttcataagcaggatggtaaatcctcttacggt
aaacatgaggccattacagtgctatcaccaccacgtaagcttagaagagtgatgcctgag
cgtgggagggttgatagtttgaaggctcatgttgacaaggatcaacaagcacccatgtca
ttagattttaccatcctcgctgagcgacctccaaaccggccaacaatcaccagtgctgat
agatctcatctgaagaggaaactcgatcttgagttccaataa

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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