| Entry |
|
| Definition |
hypothetical protein
|
| Orthology |
| protein phosphatase 2 (formerly 2A), regulatory subunit B' |
|
| Organism |
aly Arabidopsis lyrata (lyrate rockcress)
|
| Pathway |
| mRNA surveillance pathway |
|
| Class |
Genetic Information Processing; Translation; mRNA surveillance pathway [PATH: aly03015]
 |
| SSDB |
   |
| Motif |
 |
| Other DBs |
NCBI-GI: NCBI-GeneID: JGI: UniProt: |
| Position |
Unknown
|
| AA seq |
500 aa  
MFKKIMKGGHRKPSKSEANEPSSYGIGLPDNRSGPGSNVVVSHASRGALVNSSPLPVAAT
PPPPPIGSVEPLPLFRDVPVSERQTLFLRKLQNCCFLFDFTDTIKNAREKEIKRQTLLEL
VDFIQSGSSKVSESCQEEMIKMISVNIFRSLPPASHENTGQEPADPEEEEPYLEPSWPHL
QLVYELLLRYVVSTDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFM
VHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLIRVLIPL
HKPKPIVVYHQQLSYCIVQFVEKDYKLADTVIRGLLKYWPVTNCAKENLFLGELEEVLEA
TQPVEFQRCMVPLFQQIGRCLTSSHFQVAERALFLWNNEHIVGLIAQNRSVILPIIYPAL
EKNIQSHWNQAVHGLTTNIKKMFMEMDPELFEECQRQYEEKQLKSKEVEEQRQYKWKRLA
EAAAERDGGGEEEEDHMITS |
| NT seq |
1503 nt  +upstreamnt +downstreamnt
atgtttaagaaaatcatgaaaggtgggcatcgaaagccctctaaatccgaagctaatgaa
ccttctagttatgggattggtctgcctgataataggtcaggtcctggctccaatgtggtc
gttagtcacgcttctcgtggtgcattggttaattcgtctccgttgccagtggctgcaact
ccaccacctccgcctatcggctccgtggagccactcccgttgtttagagatgtgccggtt
tcagagaggcaaactttgttcttgaggaaacttcagaattgctgtttcctattcgatttc
actgacacgattaagaacgcgagagagaaggagattaagaggcaaacgttgttggagctg
gtggattttatacagtctggatctagtaaggtctcggaatcgtgtcaggaagaaatgatt
aagatgatttctgttaatatattccggtctctccctccagcatcacacgagaatacgggt
caagaacctgcagatcctgaggaagaggaaccctatttggaaccttcttggcctcattta
cagctagtttacgagttgctactgagatatgttgtttcaactgacacggatacaaaggtg
gccaaacggtatatcgaccattcttttgtgttaaagttgcttgacttgtttgattctgag
gacccgagagagagggagtatttgaaaacgattcttcataggatttatgggaagtttatg
gtccacagaccctttattaggaaagcaatcaacaacatattctataggtttatttatgag
acagagagacacagtgggattggggaactcttggagattctaggtagtatcataaacggg
tttgcgttgcctatgaaggaggagcacaagctattcttaatcagggtgttgataccattg
cataagccaaaaccaatcgttgtatatcatcagcagttatcttattgcatcgttcagttt
gtggaaaaagattataagcttgcagatacagtaatcaggggattgttaaagtattggccc
gtgacaaactgcgcgaaggagaatctcttccttggagaacttgaagaagttctcgaggca
acacagcctgtcgagttccagcgttgcatggttccattattccaacagatcggtcgctgc
ctcactagctctcactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac
attgtgggtctaatcgcacagaaccgaagtgtgatccttccaatcatataccctgcattg
gaaaagaacatacagtctcactggaaccaagcagtccatggtctaaccacaaatatcaag
aaaatgttcatggaaatggatcctgagctctttgaagaatgccaaagacagtatgaagag
aaacaattgaaatccaaagaagtagaagaacaacggcaatataaatggaagagattagca
gaagcagcagcggaacgagatggaggaggagaagaagaagaagatcatatgatcacttcc
tag |