KEGG   Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_478311Help
Entry
ARALYDRAFT_478311 CDS       T01578                                 

Definition
hypothetical protein
Orthology
K11584  
protein phosphatase 2 (formerly 2A), regulatory subunit B'
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
mRNA surveillance pathway
Class
Genetic Information Processing; Translation; mRNA surveillance pathway [PATH:aly03015]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
Unknown
AA seq 500 aa AA seqDB search
MFKKIMKGGHRKPSKSEANEPSSYGIGLPDNRSGPGSNVVVSHASRGALVNSSPLPVAAT
PPPPPIGSVEPLPLFRDVPVSERQTLFLRKLQNCCFLFDFTDTIKNAREKEIKRQTLLEL
VDFIQSGSSKVSESCQEEMIKMISVNIFRSLPPASHENTGQEPADPEEEEPYLEPSWPHL
QLVYELLLRYVVSTDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFM
VHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLIRVLIPL
HKPKPIVVYHQQLSYCIVQFVEKDYKLADTVIRGLLKYWPVTNCAKENLFLGELEEVLEA
TQPVEFQRCMVPLFQQIGRCLTSSHFQVAERALFLWNNEHIVGLIAQNRSVILPIIYPAL
EKNIQSHWNQAVHGLTTNIKKMFMEMDPELFEECQRQYEEKQLKSKEVEEQRQYKWKRLA
EAAAERDGGGEEEEDHMITS
NT seq 1503 nt NT seq  +upstreamnt  +downstreamnt
atgtttaagaaaatcatgaaaggtgggcatcgaaagccctctaaatccgaagctaatgaa
ccttctagttatgggattggtctgcctgataataggtcaggtcctggctccaatgtggtc
gttagtcacgcttctcgtggtgcattggttaattcgtctccgttgccagtggctgcaact
ccaccacctccgcctatcggctccgtggagccactcccgttgtttagagatgtgccggtt
tcagagaggcaaactttgttcttgaggaaacttcagaattgctgtttcctattcgatttc
actgacacgattaagaacgcgagagagaaggagattaagaggcaaacgttgttggagctg
gtggattttatacagtctggatctagtaaggtctcggaatcgtgtcaggaagaaatgatt
aagatgatttctgttaatatattccggtctctccctccagcatcacacgagaatacgggt
caagaacctgcagatcctgaggaagaggaaccctatttggaaccttcttggcctcattta
cagctagtttacgagttgctactgagatatgttgtttcaactgacacggatacaaaggtg
gccaaacggtatatcgaccattcttttgtgttaaagttgcttgacttgtttgattctgag
gacccgagagagagggagtatttgaaaacgattcttcataggatttatgggaagtttatg
gtccacagaccctttattaggaaagcaatcaacaacatattctataggtttatttatgag
acagagagacacagtgggattggggaactcttggagattctaggtagtatcataaacggg
tttgcgttgcctatgaaggaggagcacaagctattcttaatcagggtgttgataccattg
cataagccaaaaccaatcgttgtatatcatcagcagttatcttattgcatcgttcagttt
gtggaaaaagattataagcttgcagatacagtaatcaggggattgttaaagtattggccc
gtgacaaactgcgcgaaggagaatctcttccttggagaacttgaagaagttctcgaggca
acacagcctgtcgagttccagcgttgcatggttccattattccaacagatcggtcgctgc
ctcactagctctcactttcaggttgcagaacgagcactgttcttgtggaacaacgagcac
attgtgggtctaatcgcacagaaccgaagtgtgatccttccaatcatataccctgcattg
gaaaagaacatacagtctcactggaaccaagcagtccatggtctaaccacaaatatcaag
aaaatgttcatggaaatggatcctgagctctttgaagaatgccaaagacagtatgaagag
aaacaattgaaatccaaagaagtagaagaacaacggcaatataaatggaagagattagca
gaagcagcagcggaacgagatggaggaggagaagaagaagaagatcatatgatcacttcc
tag

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