KEGG   Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_478454Help
Entry
ARALYDRAFT_478454 CDS       T01578                                 

Definition
hypothetical protein
Orthology
K04646  
clathrin heavy chain
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
Endocytosis
Brite
KEGG Orthology (KO) [BR:aly00001]
 Cellular Processes
  Transport and catabolism
   04144 Endocytosis
    ARALYDRAFT_478454
Exosome [BR:aly04147]
 Exosomal proteins
  Proteins found in most exosomes
   ARALYDRAFT_478454
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
Unknown
AA seq 1702 aa AA seqDB search
MAAANAPIIMKEVLTLPSVGIGQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVAFWKWI
TPKMLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSLGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNTYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWEKVLTEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDAVWSQVAKAQLRDGLVSDAIE
SFIRADDATQFLEVIRASEDTNVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGHLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGGYGPPP
PMGGMPGMPPMPPYGMPPMGGY
NT seq 5109 nt NT seq  +upstreamnt  +downstreamnt
atggcggcggctaacgcgccaatcatcatgaaggaggtcctaacgcttccgagcgttggg
atcggtcaacagttcatcacctttacaaatgtcactatggagtctgataagtacatatgt
gtacgagagacggcaccacagaacagtgttgtaattatcgatatgaatatgcccatgcag
cctttaaggagacctataactgctgattctgctcttatgaacccaaactcgaggatcctt
gccttaaaagctcaagttccaggaactactcaggatcatctacagatatttaacatcgaa
gcaaaagcaaagttgaagtcacatcagatgcctgagcaggttgctttttggaagtggatc
acaccaaagatgctggggctggtcacgcaaacttctgtgtatcattggtcgattgaaggt
gattctgagccagttaagatgtttgatcgaacggccaatttggcaaacaatcaaattata
aactataagtgctctcctaatgagaagtggttggtcttgattggaattgctcctggctct
cctgagagaccacaattggtaaaaggaaatatgcagcttttctcggtggatcaacagcgg
agccaggcccttgaagcacatgctgcatcatttgctcagtttaaggtccctgggaatgag
aatccttctattcttatatcctttgcaagcaagagctttaatgctgggcagataacatca
aagttgcatgttattgaacttggtgcccaaccaggaaaaccatcatttacaaaaaagcag
gcagatctctttttccccccagattttgctgatgattttcctgtggccatgcaggtctct
cacaagtttaacttgatttatgtcatcaccaagcttggcctgctgtttgtatatgatcta
gagacagcttctgctatctacagaaatcggataagtccggacccaattttcttaacgtct
gaagcttcctcacttgggggtttctatgccattaataggcgaggacaagttcttttggca
accgtaaatgaggccaccataataccttttattagtggtcaattgaacaatttggaactt
gctgtcaatcttgctaaaagaggaaacctccctggtgcagagaatctggtagtccagcgg
ttccaagagttatttgctcaaacaaagtacaaggaggctgctgagcttgctgctgaatct
cctcagggtattctacggacacctgatacagtggccaaattccagagtgttcctgtacaa
gcagggcaaactcctccattgttacagtattttgggacccttttgactagagggaagctc
aatacatatgagtctttggaactatctcggcttgttgtgaatcaaaacaagaagaacctc
ttggaaaactggttagccgaggataagttagaatgcagtgaagaactcggagaccttgtc
aagactgtggataatgaccttgctctaaaaatttacatcaaagctagagctactccaaaa
gtcgttgcagcttttgcagagcgaagggagtttgacaaaatactgatttattcaaagcag
gttgggtacacacctgattacatgtttcttctgcaaacgatacttcgtacggatcctcag
ggagcagtaaattttgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacactatcactgatcttttccttcagagaaatctgatccgtgaagccactgctttcctt
ctggatgttctgaagccaaacttacccgagcatgcttttctacaaactaaggttttggag
atcaatttggtaacctttcctaatgtggctgatgcaatcttagcaaatgggatgttcagc
cattatgacaggcctcgtgttgctcagctttgtgaaaaggctggactttacatccaatcc
ttaaagcattactcggagttacctgatatcaaacgtgtaattgttaacacacatgctatt
gagccacaggctcttgttgagtttttcggtactctttctagcgagtgggctatggagtgc
atgaaagatctcttgttggtcaacctgagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgtgagcaacttggtgtcgatgcatgcattaaactctttgagcaattcaag
tcatacgaagggctgtactttttcctaggttcatacttgagtatgagtgaggatcctgag
attcacttcaagtacatcgaagcagctgccaagactggtcaaataaaggaggttgagcgt
gtgactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagct
aagcttcctgatgcccgacctttgataaatgtctgcgatcgttttggctttgtgcctgat
cttactcattacctctacacaaacaacatgctgcgttacattgaaggttacgttcagaag
gtaaatcctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctgaa
gattttataaaaggcctcattctttctgttcgttcattacttcctgttgaaccccttgtt
gatgaatgtgaaaagagaaatcgactccgtctccttactcagttcttggagcatctagtt
agtgagggaagccaagatgtgcatgtccataatgccttgggtaaaattatcatagacagt
aacaacaaccccgagcatttcctgaccaccaatccttactacgactctaaggttgtgggt
aagtactgcgagaaacgtgatcccactctggccgtggttgcatacagaagaggacaatgt
gacgaggaactcatcaatgtcaccaacaagaactctttgttcaagttacaagccaggtac
gtagtggagaggatggatggtgacctctgggagaaggttcttacggaagaaaatgaatat
aggaggcaacttatcgaccaagttgtgtctactgctttacctgaaagcaagagcccagag
caagtttctgcagctgttaaagcattcatgactgctgatctgcctcatgagcttattgag
cttcttgaaaaaattgtgcttcaaaattctgccttcagtggaaatttcaatctgcaaaat
ctgcttatactgacagctattaaggcagatccgtctagagttatggattacattaacagg
ctggataattttgatggtccagctgttggagaagtggcggttgacgctcaattgtatgag
gaagcatttgcgatttttaagaagttcaacttaaatgttcaggctgtcaacgtattgttg
gataacgtcagaagcattgagcgtgctgttgagtttgctttccgggttgaagaagatgct
gtttggagtcaagtcgctaaggctcagctcagggacggattagtcagtgatgctattgag
tcctttatccgagctgatgatgccactcagttcctggaggtcatccgcgcctctgaagat
actaatgtctatgatgacttggtgagataccttctgatggttagacagaaggtgaaggaa
cccaaggtggatagtgagctcatctatgcttatgcaaagattgaaaggttgggtgagatt
gaagaatttattctgatgcccaacgttgccaaccttcaaaatgttggtgaccgcttgtat
gatgaagctctgtatgaggctgcaaagataatatatgcattcatatcgaattgggccaag
ttagccgtcacccttgtgaagttgcaacagttccaaggtgctgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgctgaggaattc
cgactggcccaaatctgtggacttaacattatcatacaggtggatgacctggaagaagta
agcgagtactaccagaacagaggatgcttcaatgaattgatctcacttatggagagtgga
cttggtctggaacgtgctcacatggggatcttcaccgagttgggtgtcctgtacgccaga
tatcgttatgagaagcttatggaacacatcaagttgttctcgactcgcctcaatattccc
aaacttatccgggcctgtgatgaacaacagcattggcaggaacttacctatctttacatt
caatatgatgagtttgataatgctgcaaccactgtcatgaatcattctcctgaagcatgg
gagcacatgcaattcaaagacattgttgccaaggttgcgaatgttgagctttactataag
gccgttcacttctacttgcaagagcaccctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagatcacactcgtgtcgttgatattatgcgcaaggctggtcacttgcgt
cttatcaagccatacatggttgcagttcagagcaataatgtctctgctgtaaatgaagct
ctgaatgagatatatgtagaagaagaagactatgacaggttgcgcgagtctattgatttg
catgacagttttgaccagataggtctcgcccagaagattgagaaacacgagcttgtcgaa
atgagacgtgtggctgcttatatctacaagaaagctggtagatggaagcaatcgattgct
ttatcaaagaaagataacatgtacaaggactgtatggaaactgcttcgcaatccggcgac
catgatcttgcagaacaacttctcgtctacttcattgaacaggggaaaaaggaatgcttt
gctacatgtctctttgtctgttatgacttaatccgaccagacgttgctctagaacttgct
tggatcaacaatatgatagactttgccttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggatgagctaatcaaggacaagctggaggcacaaaaagaggtgaaggcc
aaagaacaggaagagaaggatgtcatgtcccaacagaacatgtacgcccaattattgcca
ttggctctacctgcccctccgatgccaggaatgggaggtggtgggtatggtccgccacca
ccaatgggcggaatgccaggaatgcctccaatgccaccgtatggaatgcctccaatgggc
ggctactaa

DBGET integrated database retrieval system