KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_479084

Entry

ARALYDRAFT_479084 CDS T01578

Definition

binding protein

Orthology

K03350

anaphase-promoting complex subunit 3

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly04120

Ubiquitin mediated proteolysis

Class

Genetic Information Processing; Folding, sorting and degradation; Ubiquitin mediated proteolysis [PATH:aly04120]

SSDB

Motif

Pfam:

TPR_1 TPR_11 TPR_2 Apc3 TPR_8 TPR_14 TPR_16 TPR_12 TPR_17 TPR_19 TPR_7 TPR_6 TPR_9 TPR_15 NARP1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 717 aa
MENLLANCVQKNLNHFMFTNAIFLCERLLAQFPSEVNLQLLARCYLSNSQAYSAYYILKG
SKMPQSRYLFAFSCFKLDLLGEAEAALLPSEDYVEEVPGGAAGHYLLGLIYRHSGRKNSS
IQQFRMALSFDPLCWEAYGELCSLGAAEEASTVFGNVASQRLQITCVEQRINFSEGATVN
QLTDSDKASKDTSLWQTEHFPGENQEDLKIKQQPGADIPPDTDRQLNTNGWDLNTPSPVL
SQVMDAPSPLLHKNMRRPAVEGSLMSVHGVRARRRNFFSEELSAEALEESGRRRSARIAA
RKKIPMSQSFGKDSHWLHLSPSETNCAPSLSSVIGKCRTQSSKEATTSGQSVSDIGSSVD
DEEKSTPSESSPDRFSLISGISEVLNLLKILGDGHRHLHMYNCQEALLAYQKLSQKQYDT
HWVLLQVGKAYFELQDYFNADSVFTLAHQKYPYALEGMDTYSTVLYHLKEEMRLGYLAQE
LISVDRLSPESWCAVGNCYSLRKDHDTALKMFQRAIQLNERFTYAHTLCGHEFAALEEFE
DAERCYRKALGIDTRHYNAWYGLGMTYLHREKFEFAQHQFQLALQINPRSSVIMCYYGIA
LHESKRNDEALMMMEKAVLTDVKNPLPKYYKATILNSLGDYHKAVKVLEELKECAPQESS
VHALLGKIYNQLKQYDKAVLHFGIALDLSPSPSDAVKIKTYMERLILPDELATEENL

NT seq 2154 nt +upstreamnt +downstreamnt
atggagaatctactggcgaattgtgtccagaaaaacctcaaccattttatgttcaccaat
gccatcttcctttgcgaacgtcttctcgcccaatttccctctgaggtgaacctgcaattg
ttagctaggtgttacttgagtaacagtcaagcttatagtgcatattatatcctcaaaggt
tcaaaaatgcctcagtctcggtatttatttgcattctcatgctttaagttggatcttctt
ggagaggctgaagctgcattgttgcccagtgaagattatgttgaagaagttcctggtggt
gcagctgggcattatcttcttggtcttatatatagacattctgggaggaagaacagttca
atacaacagtttaggatggcattgtcatttgatccattgtgttgggaagcatatggagaa
ctttgtagtttaggtgccgctgaagaagcctcaacagttttcgggaatgttgcttcccag
cgtcttcagataacttgtgtagaacaaagaataaacttctcagaaggagcaaccgtaaac
cagcttacagattctgataaggcttcaaaagatacaagtttatggcaaacagaacacttt
ccaggagagaaccaagaagatctgaaaataaagcagcagcctggagcagatattccgcca
gatactgacaggcaacttaatacaaatggatgggacttgaacacaccttctccagtgctt
tcgcaggtaatggatgctccatcgcctctgcttcataagaatatgcgtcgtccagcagtg
gaaggatctttgatgtctgtacatggagtgcgtgcgcgtcgaagaaacttttttagtgaa
gaattgtcagcagaggctctagaagaatctgggcgtcgccgtagtgctagaatagcagca
aggaaaaagattcctatgtcgcagtcatttggaaaagattcccattggttacatctttca
ccttctgagacaaactgtgcaccttctctttcctccgtgattggaaaatgcagaacccaa
agcagcaaggaagcaacgacatcaggccagtctgtaagtgacattggaagctctgttgat
gatgaggaaaagtcaactcctagtgaatcttccccggatcgtttcagcctcatttctgga
atttcagaagtgctaaaccttctgaaaattcttggagatggccataggcatttacatatg
tacaactgtcaggaagctttgttggcatatcaaaagctatctcagaaacaatacgataca
cactgggttctcttgcaagttggaaaagcatattttgagctacaagactacttcaacgct
gactctgtctttactcttgctcatcaaaagtatccttatgctttggaaggaatggatacg
tactccactgttctttatcacctgaaagaagagatgaggttgggctatctggctcaggag
ctgatttctgttgatcgcctgtctccagaatcctggtgtgctgttgggaactgttacagt
ttgcgtaaggatcatgatactgctctcaaaatgtttcagagagctatccaactgaatgaa
agattcacatatgcgcataccctttgtggtcacgagtttgccgcattggaagaatttgag
gatgcagagagatgctaccggaaggctctgggcatagatacaagacactataatgcatgg
tacggtcttggaatgacctatcttcatcgggagaaattcgagtttgcgcagcatcaattt
caactggctctccaaataaatccaagatcttcagtcatcatgtgttactatggaattgct
ttgcatgagtcaaagaggaacgatgaggcgttaatgatgatggagaaggctgtactcact
gatgtgaagaatccgctcccgaagtactacaaagctaccatattaaacagcctcggtgat
tatcacaaagccgttaaagtcttagaagagctcaaagaatgtgctcctcaagagagcagt
gtccatgcgttgcttggcaaaatatacaatcagctaaagcaatacgacaaagccgtgtta
catttcggtattgctttggatttaagcccttctccatctgatgctgtcaagataaagact
tacatggagaggttgatactaccagacgaactggcgacggaggagaatttgtag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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