KEGG   Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_483018Help
Entry
ARALYDRAFT_483018 CDS       T01578                                 

Definition
hypothetical protein
Orthology
K06269  
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aly00001]
 Genetic Information Processing
  Translation
   03015 mRNA surveillance pathway
    ARALYDRAFT_483018
Enzymes [BR:aly01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     ARALYDRAFT_483018
Protein phosphatases and associated proteins [BR:aly01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    Catalytic subunits
     ARALYDRAFT_483018
Transcription machinery [BR:aly03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     ARALYDRAFT_483018
Spliceosome [BR:aly03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    ARALYDRAFT_483018
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
Unknown
AA seq 319 aa AA seqDB search
MATTTQGQQTAMDTAVLDDIIRRLTEVRLARPGKQVQLSEAEIKQLCTTARDIFLQQPNL
LELEAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKI
KYPGNFFLLRGNHECASINRIYGFYDECKRRFNVRVWKVFTDCFNCLPVAALIDDKILCM
HGGLSPDLDHLDEIRNLPRPTMIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKV
SEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCS
FQILKPAEKKTKFMMSTKI
NT seq 960 nt NT seq  +upstreamnt  +downstreamnt
atggcgacgacgacgcaggggcagcaaacggcgatggacacggcggttctcgatgatata
atcaggcgactcacggaggtccggttagctagaccaggaaagcaagtccagctctcggaa
gctgagatcaaacagctctgtactacagctagagatatttttcttcagcaacccaatttg
cttgagcttgaggctcccatcaaaatctgtggtgacatacatgggcaatatagtgatttg
ctgaggctattcgagtacggtggcttccctcctagtgccaattatctttttctgggggac
tatgtggaccgaggcaaacagagtcttgaaacaatatgtctcttactagcttacaagatc
aaataccctgggaacttttttctactaaggggaaaccacgaatgtgcttctatcaatcgg
atttacgggttttatgatgaatgtaaaaggaggttcaatgtgagggtatggaaggttttc
actgactgttttaattgccttcctgttgcggcgcttatagatgacaaaatattgtgtatg
cacggtggactttcgccggatcttgaccatttggatgagattagaaacttgcctcgtcct
actatgattccggataccgggcttctctgtgatttgctctggtctgatcctgggaaagat
gttaaaggatggggaatgaatgatagaggtgtttcatacacctttggtcctgataaagtt
tctgagtttcttacaaaacatgatttagaccttgtgtgccgtgcccatcaggtcgtggag
gatggttatgagttctttgctgatagacaacttgtgacggtgttttcagctccgaactac
tgtggtgaatttgataatgctggtgcgatgatgagcgtggacgagaaccttatgtgctcg
tttcagattttgaagcccgcggagaagaagaccaaattcatgatgtccacaaagatttga

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