KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_483877

Entry

ARALYDRAFT_483877 CDS T01578

Definition

pectinesterase family protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00040	Pentose and glucuronate interconversions
aly00500	Starch and sucrose metabolism
aly01100	Metabolic pathways

Module

aly_M00081

Pectin degradation

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:aly00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:aly00500]

SSDB

Motif

Pfam:

Pectinesterase PMEI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 577 aa
MIGKVVVSVASILLIVGVAIGVVAFINKNGDANLSPQMKAVRGICEATSDKASCVKTLEP
VKSDDPNKLIKAFMLATRDALTTSSNFTGQTEVNMGSSISPNNKAVLDYCKRVFMYALED
LSTIVEEMGEDLNQIGSKIDQLKQWLIGVYNYQTDCLDDIEEDDLRKTIGEGIANSKILT
TNAIDIFHNVVSAMAKLNNKVDDFKNMTGGIPTPDNKGAPPVVDESPVADPDGPARRLLE
DIDETGIPTWVSGADRKLMAKAGRGGNGGAVGSERPLWWLRTEADSLRRFNKPLMLVLRI
TQADASSTSRLKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWL
GFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFG
KSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKLGIVLQNCRIVPDRKLTPERLTVA
TYLGRPWKKFSTTVIMSTEMGDLIRPEGWRIWDGENYHMSCRYVEYNNRGPGAFTNRRVN
WAKVARSAGEVNGFTVANWLGPIYWIQQANVPVTIGL

NT seq 1734 nt +upstreamnt +downstreamnt
atgattggaaaagttgttgtctcggtggcctccatcctcttaatagtcggagttgccata
ggagtcgttgccttcataaacaaaaatggtgatgctaatctgtctccgcaaatgaaagcg
gttcgaggaatttgcgaggcgacttccgacaaagcctcatgtgtcaaaactctcgagccg
gtcaagagcgatgacccaaacaagctaatcaaggctttcatgctcgctaccagagacgca
ttaaccacatcgtctaacttcacgggtcaaaccgaagtaaacatgggctcgagcatctcg
ccaaacaacaaagccgttcttgattactgcaagagagttttcatgtacgcgcttgaggat
ctcagcaccattgttgaggaaatgggtgaagatcttaaccagatcgggagcaaaatcgac
cagctcaaacaatggttaatcggtgtttacaattaccaaactgattgtcttgacgatatc
gaagaagatgatttaagaaagacgattggtgagggcattgcaaactccaagattctcact
accaacgctattgacatcttccacaatgtcgttagcgccatggccaagcttaacaacaag
gttgacgacttcaagaacatgacaggcggaatccccactcccgacaacaaaggagcccct
cctgttgttgatgaatctcccgtggccgaccctgatggtcctgctcgtcgtcttcttgaa
gacattgacgagaccggaatcccaacatgggtttcaggtgctgacaggaagctcatggct
aaggctggacgtggcggtaacggcggtgctgtaggatcagagcgacctttgtggtggcta
aggacggaagcggacagtttaagacggttcaacaagccgttgatgcttgtcctgagaata
acccaggccgatgcatcatctacatcaaggctgaagaagaacaacatcttcatgtttgga
gatggtgcaagaaagacagtcatttcttacaacagaagtgttgctctcagccgtggaacc
accacatcccttagtgccacagttcaggttgaatcggaaggattcatggcgaaatggttg
ggattcaagaacaccgccggtccaatgggacaccaagccgcggctatccgagtgaacgga
gaccgggccgtgatcttcaactgcagattcgacggttaccaagacaccttgtacgtgaac
aacggtcgtcagttctacagaaactgtgtcgtctcgggaacagtcgacttcatcttcggc
aaatccgcaactgtgatccaaaacacactaattgttgtccgtaaaggaagcaagggacaa
tacaacacggtcacagccgatggaaacgaactgggcttagggatgaaacttggtatcgtc
ctccaaaactgccgcatcgttcccgacaggaaactaacgccagagagattaaccgtggcg
acatacttgggaaggccgtggaagaaattctcgaccaccgtgataatgagcaccgagatg
ggagatttgattagaccagaaggttggaggatttgggatggggaaaactaccacatgtca
tgtaggtacgttgagtacaacaaccgtggaccaggagcattcactaacagaagagttaac
tgggctaaggtcgctaggtctgcaggtgaggtcaatggcttcactgttgctaactggtta
ggtcctatttactggattcaacaagccaatgttcctgtcacgattggattataa

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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