KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_485844

Entry

ARALYDRAFT_485844 CDS T01578

Definition

hydrolase, hydrolyzing O-glycosyl compounds

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00052	Galactose metabolism
aly00511	Other glycan degradation
aly00600	Sphingolipid metabolism
aly01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:aly00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:aly00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:aly00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 1107 aa
MVSLATQMIIPSENGYRVWEDQTLFKWRKRDPHVTLRCHESVQGALRYWYQRNNVDLTVS
RSAVWNDDAVQAALDSAAFWVDGLPFVKSLSGYWKFFLAPKPANVPDKFYDPAFPDSDWN
ALPVPSNWQCHGFDRPIYTNVVYPFPNDPPHVPEDNPTGCYRTYFQIPKEWKDRRILLHF
EAVDSAFFAWINGNPVGYSQDSRLPAEFEISDYCYPWDSGKQNVLAVQVFRWSDGSYLED
QDHWWLSGIHRDVLLLAKPKVFIADYFFKSKLADDFSYADIQVEVKIDNMQESSKHLVLS
NFIIEAAVFDTKNWYNSEGFNCELSPKVAHLKLNPSPSPTLGFHGYLLEGKLDSPNLWSA
EQPNVYILVLTLKDTSGKVLDSESSIVGIRQVSKAFKQLLVNGHPVVIKGVNRHEHHPRV
GKTNIEACMVKDLIMMKEYNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDLS
GHLKHPAKEPSWAAAMLDRVVGMVERDKNHTCIISWSLGNEAGYGPNHSAMAGWIREKDP
SRLVHYEGGGSRTSSTDIVCPMYMRVWDIIKIALDQNESRPLILCEYQHAMGNSNGNIDE
YWDAIDNTFGLQGGFIWDWVDQGLLKLGSDGIKRWAYGGDFGDQPNDLNFCLNGLIWPDR
TPHPALHEVKHCYQPIKVSLTDGLIKVANTYFFHTTEELEFSWKIHGDGLELGSGTLSIP
VIKPQNSFEIEWKSGPWFSFWNDSNAGELFLTINAKLLNPTRSLEAGHLLSSTQIPLPAK
RQIIPQAIKKTDTIITCETVGDFIKISQQDSWELMINVRKGAIEGWKIQGVLLMKEDILP
CFWRAPTDNDKGGGDSSYFLRWKAAQLDNVEFLVESCSVKSITDKAVEIEFIYLGSSASV
SSKTDALFKVNVTYLIYGSGDIITNWSVEPNSDLPPLPRVGIEFHIEKTLDRVEWYGKGP
FECYPDRKAAAHVAIYEHNVGDMHVPYIVPGESGGRTDVRWVTFRNKDGVGIYASTYGNS
SPMQMNASYYTTGELNRATHEEDLIKGQNIEVHLDHKHMGLGGDDSWTPCVHDKYLIPPK
PYSFSLRLCPITASTSVLDIYKDQLPC

NT seq 3324 nt +upstreamnt +downstreamnt
atggtttcattagcgacccaaatgattattccttctgaaaatgggtatagagtttgggag
gatcagacccttttcaagtggcgcaagagagatcctcatgtcaccttgcgttgccatgaa
tccgtccaaggggctttgaggtactggtatcagcgcaataacgtggatctcaccgtatca
agatctgctgtttggaatgatgatgctgttcaagctgctcttgatagcgctgctttttgg
gttgatggcttgccctttgttaagtctttatctggttactggaagtttttcttggctcct
aaacctgcaaatgttcctgacaaattttatgatcctgcattccctgattcagactggaac
gctttacccgttccttccaattggcagtgtcatggatttgatcggcctatctataccaat
gtggtgtaccctttcccgaatgacccgcctcatgttcctgaggataatcctactggttgc
tacagaacctacttccagattcccaaagagtggaaggacagaagaatacttcttcacttt
gaagctgtagactccgcattctttgcttggataaatggcaaccctgttgggtacagtcaa
gacagcaggttaccggctgaatttgaaatatctgattattgctatccatgggactcgggg
aaacaaaatgttcttgctgttcaagtctttagatggagtgatggttcataccttgaagac
caagatcattggtggttgtctggtattcatcgagatgtgcttttgttagcaaagcccaag
gtattcattgctgactactttttcaagtcaaaattggcagatgacttttcctacgcagac
atccaggttgaagtgaagatagacaatatgcaggagtcctcaaagcatcttgttctttct
aacttcatcatagaggctgccgtatttgatactaaaaattggtacaactctgaaggattt
aattgtgaactttctcccaaggtggctcatttgaagcttaatccttctccaagcccaact
cttggatttcatggttatttgcttgagggaaaactggattcgccaaatctctggtcagct
gaacaaccaaatgtttacatcctcgttttaactctaaaagatacatctgggaaagtcctt
gattctgaatcaagcattgttggcattcggcaagtttcaaaggccttcaaacagcttctt
gttaatgggcacccagtcgtgataaaaggtgtaaacaggcatgagcaccatccacgtgtt
gggaagaccaatatagaggcctgcatggtcaaggatttaatcatgatgaaagaatataat
atcaatgcggtgcgaaacagtcattatcctcaacatccccgctggtatgaattatgtgat
ttgttcggcatgtacatgatcgatgaagccaatatagagacacacggttttgatctctct
gggcatctgaagcaccctgcgaaagagccaagctgggcagccgctatgctggatcgagta
gttgggatggttgaaagagacaaaaaccatacatgcataatttcttggtcactgggaaat
gaggctggctatgggcctaatcattctgctatggcaggttggattagggaaaaggacccc
tcacggttggtgcactatgaaggtggtggttccagaacaagttctactgatatagtctgc
cctatgtacatgcgggtttgggacatcatcaagattgcacttgatcaaaatgaatcacga
ccgttgatattatgcgagtatcaacatgctatgggtaacagcaacgggaatatagatgag
tactgggatgcaattgacaatacctttggcctgcaaggaggtttcatatgggactgggtt
gaccaggggctattgaaactggggtcagatggcattaagcgttgggcatatggaggggac
tttggtgaccagcctaatgatttgaacttctgtctcaatgggcttatatggcctgaccga
actcctcatccagcactccatgaggttaagcattgctatcaaccaatcaaggtttcattg
acggatggcttgataaaggttgcaaacacttactttttccacacaacagaagaattggag
tttagttggaaaattcatggggacggtcttgaacttggatctggaactctctctattcct
gtgataaagccacaaaatagttttgagatagagtggaagtcaggtccatggttttccttc
tggaatgactcaaatgctggagaattgtttctgacaataaatgccaagcttctaaatcct
actcgttcgcttgaagctggtcatcttttgtcttcaacgcagattcctttaccagcaaag
agacaaataataccgcaggcgataaaaaagacagacactattatcacttgtgaaactgtt
ggagatttcattaagatcagccagcaagattcatgggagctaatgataaatgtccgaaaa
ggagctattgaaggttggaagattcaaggagttctccttatgaaggaagatatactgcca
tgcttttggcgagcacctacagacaatgataaaggtggaggtgactctagttattttttg
agatggaaagcagcacagttggataatgtggagttccttgttgaaagctgttcagtgaag
agcatcactgataaagccgtagagatagagttcatataccttggttcttcagcttctgtc
tcttcaaagacagatgccttattcaaagtcaatgttacatatctgatctatggttccgga
gatatcatcaccaattggtctgtagaaccaaactctgatcttccaccgctaccacgtgta
ggtatagaatttcacattgaaaaaacactggaccgtgtagaatggtatggcaaaggtcca
tttgagtgttacccagaccgaaaagcagcagcccatgtggccatatatgaacacaatgtt
ggagacatgcatgtcccttatattgttccaggagaaagtggtggtagaacagatgttagg
tgggtgacattccgaaacaaagatggtgtaggaatatatgcttcaacatatggtaactct
tccccaatgcagatgaatgctagttactatacaacaggtgagcttaatcgtgcaacgcat
gaagaggatcttatcaaaggacaaaacatcgaggtgcatctggaccacaaacacatgggt
cttgggggagatgatagctggactccatgtgttcacgataagtatctgattccacccaaa
ccatattcattctctctaaggttgtgcccaattactgcatccacttcggtcttggacatc
tacaaggaccaacttccctgctag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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