KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_485868

Entry

ARALYDRAFT_485868 CDS T01578

Definition

alpha subunit of tryptophan synthase

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00260	Glycine, serine and threonine metabolism
aly00400	Phenylalanine, tyrosine and tryptophan biosynthesis
aly01100	Metabolic pathways
aly01110	Biosynthesis of secondary metabolites
aly01230	Biosynthesis of amino acids

Module

aly_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:aly00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:aly00400]

SSDB

Motif

Pfam:

Trp_syntA His_biosynth PcrB ThiG BtpA NanE Ribul_P_3_epim DUF2114 IGPS

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 313 aa
MAIAFKSGVFFLQSPKSQIGFRHASSSPDSSLSFKRFTPMASLSTSSPTLGLADTFTQLK
KQGKVAFIPYITAGDPDLSTTAEALKVLDACGSDIIELGVPYSDPLADGPVIQAAATRSL
ERGTNLDNILEMLDKVVPQISCPISLFTYYNPILKRGLGKFMSTIRAVGVQGLVVPDVPL
EETEMLRKEALNNDIELVLLTTPTTPTERMKRIVDVSEGFIYLVSSIGVTGARASVSGKV
QSLLKDIKEATDKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKE
LEKLTKSLKSALL

NT seq 942 nt +upstreamnt +downstreamnt
atggcgattgctttcaaatccggcgtcttcttcctccaatccccaaaatcccaaattgga
ttccgccatgcttcttcttctcctgattcatcgctttctttcaagagattcactcccatg
gcttctctctccacctcttctcctactctcggtctcgctgatactttcacccagctcaaa
aaacaaggcaaagtagcattcataccgtatatcacagctggtgatccagatctctctact
actgctgaagcactgaaagttcttgatgcttgtggctctgacataatcgaattgggtgtt
ccttactctgatcctttagctgatggacctgttattcaggctgcggcaacgaggtcgttg
gagaggggaaccaacctcgataacatccttgagatgttggataaggttgttccacaaata
tcttgtccgatttcgttgttcacgtattacaacccgattcttaaacgtggattggggaag
ttcatgtctaccatcagagctgttggtgtacagggacttgtggttcccgatgttcctctt
gaggaaactgagatgctgagaaaagaagccctcaacaacgacattgagctggtcctactc
actacaccaactacaccaacagagagaatgaagcgaattgttgacgtgtcagaaggattt
atttaccttgtgagctcaattggagtgactggtgcacgagcatctgtaagcggaaaggtt
cagtcgctcttgaaggatatcaaagaggcgacagacaagccagtggcagtcggttttgga
atatcaaagccggagcatgtgaaacagatagctggatggggagcagatggagtgatcgta
ggcagtgcaatggtgaagctattgggggatgcaaagtcgccaacagaaggacttaaggag
cttgagaaactcaccaagtctctcaaatctgctcttctttga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (34)   

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