KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_487284

Entry

ARALYDRAFT_487284 CDS T01578

Definition

hypothetical protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00040	Pentose and glucuronate interconversions
aly00500	Starch and sucrose metabolism
aly01100	Metabolic pathways

Module

aly_M00081

Pectin degradation

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:aly00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:aly00500]

SSDB

Motif

Pfam:

Pectinesterase PMEI

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 616 aa
MQSQHFSSSLLFLALLSLSWALLVSPTQPPPAWPAPTQPPSEPPTSPPSQSPSLPPSQPP
TPPPSQSPSQPSPLPPNIACKSTPYPKLCRTILSAVKSSPSDPYHYGKFTMKQCLKQARR
LSKVINRFAHRVEDDPGASTVEEVSAVADCGELAQLSVDYLETVTEELKAAELMTAALVD
RVTSLLGGVVTNQQTCLDGLVDAKSGFATAIGTPLGNLTRLYSVSLGLVSHALNRNLKRY
KGSKGKIFGGGNKPVREPLETLIKVLRKTCDKSKDCRKADRNLGELGETSGGSILVREAV
TVGPYETDNFSTITEAVAAAPNNTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGI
NKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTF
YRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVT
AHGRTDPNQKTGISIINCTIGAAPDLAADPNSTMTFLGRPWKPYSRTVYIQSYISDVVQP
VGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLLNLAEAMNFTVYNFTLGDTW
LPQTDIPFYGGLLHTE

NT seq 1851 nt +upstreamnt +downstreamnt
atgcaatctcaacacttctcttcatctctcttgttcttggctcttctctctctttcatgg
gctttgctagtctcaccgacacagcctcctccggcatggcctgcaccaacacagcctccg
tcagaacctccaacgtcgcccccgtcacagtctccatcgctgcctccttcacaacctcca
acaccgcctccgtcacagtctccatcgcagccttctccactaccaccaaacattgcttgt
aaatccactccttatccgaagctctgccgcacgatcctttccgccgttaaatcctcaccg
tccgatccttaccattacggaaagttcacaatgaaacaatgcctcaaacaagctcgtcgc
ctctccaaagtcatcaaccgctttgcccatcgcgtggaagatgatccaggtgcgtcgacg
gtggaagaggtcagtgcggtggctgattgcggcgagctagcacagcttagcgttgattac
ctcgaaacggttacggaggagctgaaagcagcggagctgatgacggccgccctcgttgat
cgtgttacgagtcttctcggtggcgttgtgactaaccagcaaacgtgcctcgacggtctt
gtggacgctaagagcgggtttgcgacggcgattggaacgccgttggggaatctcacgcgc
ctctatagtgtgtcgttagggcttgtgagtcacgcgcttaaccgtaatctgaagaggtat
aaagggtccaaggggaaaatctttggtggtggtaacaaacccgttcgtgaacctctcgag
actttgattaaggttttacgcaaaacatgcgacaagagcaaggattgtcggaaagctgac
agaaatttaggtgagctaggagagacgagcggtggctcgatcctcgtaagggaagcagta
accgtcggtccatatgaaaccgataacttctctaccataactgaggccgtcgctgccgca
cctaacaacacattcccggagcaaggctacttcgtaatctatgcaagggcaggtctttac
gaagaatatgttgttatttcaaataaaaaaaggaacatcatgcttattggagatgggatc
aataaaactatcatttctggaaaccacagttttattgatggttggacgacttataattct
tcaacctttgcggtggtcggagaccgatttgttgcagttgatgtaacattccgaaacaca
gctggaccagagaaacaccaagccgtggccgtaagaaacaatgcggatgggtcaacattt
tatcgatgtagttttgaaggctatcaagatactctttacgttcattctttaagacagttc
tatcgtgaatgtgatatatatgggaccatagattttatattcggaaatgcggctgcaatc
tttcaaaattgcaacatatatgcccgaaaaccgatggcaaatcagaagaatgcagtgaca
gcccatggaagaaccgatccaaaccagaaaactggaatctccatcattaattgtactata
ggagctgccccggacctcgcggctgaccccaactcgaccatgacattccttgggcgacca
tggaagccttactcgaggacggtctacatacaatcatacatcagcgatgttgtccaaccc
gttgggtggctagagtggaatgggacaaccgggctagacacgatctcctatggtgaatat
gacaactttggaccgggggctgacacaagtaaaagggtccaatggtcaggatatagccta
ttgaacttggcagaagccatgaacttcaccgtatataacttcactttgggagacacttgg
ttgcctcagaccgacattcccttctacggcggtttgcttcacaccgaatga

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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