KEGG   Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_488676Help
Entry
ARALYDRAFT_488676 CDS       T01578                                 

Definition
(RefSeq) cap-binding protein nCBP
  KO
K03259  
translation initiation factor 4E
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
RNA transport
Module
eIF4F complex
Brite
KEGG Orthology (KO) [BR:aly00001]
 Genetic Information Processing
  Translation
   03013 RNA transport
    ARALYDRAFT_488676
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     ARALYDRAFT_488676
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     ARALYDRAFT_488676
Translation factors [BR:aly03012]
 Eukaryotic Type
  Initiation factors
   eIF-4
    ARALYDRAFT_488676
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
Unknown
AA seq 221 aa AA seqDB search
MEVADRRDEEIRDSGNMDSIKSQYVTDSVSEERRSRELKDGLHPLRYKFSIWYTRRTPGV
RNQSYEDNIKKIVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEVGANCNGG
KWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAV
MGLRDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG
NT seq 666 nt NT seq  +upstreamnt  +downstreamnt
atggaggttgcggataggagagacgaggagatcagggactctggaaacatggacagcatc
aagtcccaatatgttaccgactctgtttccgaagaacgtcgctctcgtgagctcaaggat
ggtctccatcctctacggtacaagttttcgatatggtacactcgtcgcacaccaggggtt
cggaaccaatcttatgaggataacattaagaagattgtggaattcagcactgttgaaggg
ttttgggcctgctactgtcaccttgctcgttcttctctcttgcctagtccaacagatctt
catttctttaaggatgggattcgtccgttgtgggaggtaggtgccaactgcaatggagga
aagtggatcattcgtttctcaaaagttgtatctgctcgcttctgggaggatctgcttctt
gcattggtaggcgaccagcttgacgacgctgataacatatgtggggcagtactgagtgtc
cgcttcaatgaggacatcattagtgtatggaatcgcaatgcttctgaccatcaggcagtg
atgggtttgagagactcaatcaagcggcatttgaagttgccccatgcatatgtcatggaa
tacaagccccacgatgcttctctccgcgacaactcttcctacagaaacacatggctgaga
ggatag

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