| Entry |
|
|---|
| Gene name |
UBP16
|
|---|
| Definition |
ubiquitin-specific protease 16
|
|---|
| Orthology |
| ubiquitin carboxyl-terminal hydrolase 36/42 [EC: 3.1.2.15] |
|
|---|
| Organism |
aly Arabidopsis lyrata (lyrate rockcress)
|
|---|
| Class |
|
|---|
| SSDB |
   |
|---|
| Motif |
 |
|---|
| Other DBs |
NCBI-GI: NCBI-GeneID: JGI: UniProt: |
|---|
| Position |
Unknown
|
|---|
| AA seq |
1007 aa  
MLLVLDLGISTLVLVISLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASQEAARAELEAS
VEFSSVAISNIFHCPVCYCIATTRCSRCKSVRYCSGKCQIIHWRQGHKDECRPASIVYDS
EDEKSDSDLRFREENERNTLEETLLLDPQPVIIPIGETILSNPARSPEDGNGDIADNKDD
LIDKEEAVSVAETSGSSFSGFSSSPRNDSGDEISLCESFSSSESERSESLLDAHVSVEPE
DTCFSTIDDAPSKLLSPKFVHLVESVDNLANLPKLSVHKPGGDTGQNQSQSRSLHSLVTD
RHPVSTDPSPLKSSDFWGTALGSAERVTESCDKSKSGRPGNSSLHFSFGSSRDTSAAKVS
EHKRSILKEAPSAALGTGNNLKERNAKIFDEAEIALPTSSSTDAPSPLDTSNLPHVTLQK
LKSASSENGCMLAPLKVGEVQLLASKASNTKECADLMKHSPLGAKSVRVLDHQKQNGAAV
HRISSLNGRSGLKASVLKVVDQWTRPKSENEMAGRHGHKGLFPYEVFAKLYTNKIEFQPC
GLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACTKKEQCFTCGFEKLVLKAKEGKS
PLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMPKSSKLEDTTL
IGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGDNK
YRCGSCKSYERAKKKLKITDPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGS
EKSHDYKLYGVIVHLDIMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERIMTKGAYML
FYARCTPMPPKLAVCTKTEATNKRSRVPVPKAKEKSTISMSRSVSTSSPVLSSNTPGGRS
GNIQSFYSSFQRLQKILEDDSASDSSSLFDSNSDECSCSTDSTSMDDFADFIFGDHQGRA
HGQSEAPSPTSSSSSSSPPFTRHSPLSRSSLETYGTSRHQLPLGGER |
|---|
| NT seq |
3024 nt  +upstreamnt +downstreamnt
atgctccttgttttggatctagggatttctactctagtccttgtgatctctcttgttctg
cctctgatcggcctctttgttcgtcacaaatggagggtcgctgcccaaaggagggaagag
attaggagacttcttattcatgcgtctcaagaggctgctagggctgagctagaggcctct
gttgagttctcttctgtggccatctctaatatcttccattgtcctgtgtgctattgtatt
gccacgactcgatgctctcgctgcaaatccgttcgatattgttccgggaaatgtcaaatc
attcactggcggcaaggtcacaaagatgaatgtcgtcctgcttccattgtatatgatagt
gaagatgagaaaagtgattctgatttgagattcagagaagagaatgaacggaatactctt
gaggaaactttactgctggatccacaaccagttattataccaatcggggaaacaatatta
tctaatcctgccagatctcctgaagatgggaatggagatattgcagataacaaagatgac
cttatagataaggaagaagctgtttctgttgctgaaacatctggatcctcgttttctggc
ttctcctcctccccccgtaatgactctggtgatgagatttctctttgtgagagctttagt
tcatctgaatccgagagatcagagtccctacttgatgctcatgtctctgtagagccagaa
gacacctgtttcagcaccatcgatgatgctccatccaaactgttgtctcctaaatttgtg
cacttggttgaatctgtagataacctcgctaatctgcctaaattaagtgtacataagcct
gggggtgatactgggcagaaccagagccaatcaaggagcttacactcattagttacggat
aggcacccagtatccactgacccatctcctctaaagtcatctgatttttggggtacggct
cttggatcagcagaacgtgtaactgagtcttgtgataaatctaaatctggtagacctggt
aactcctctctgcatttctcctttggctcctctagagacacctcagctgctaaagtttct
gagcacaaaaggagcattttaaaagaagctcctagtgctgcattagggactggtaataat
ctaaaagaaagaaatgctaaaatatttgatgaagctgaaattgccttaccaacttcctct
tctactgatgcgccgagtcctttggacacttctaatttgccccatgtgacccttcagaag
ttaaagagcgccagtagtgaaaatggctgtatgttggcccctttgaaggttggggaagtc
caacttttggcatccaaggcctcgaataccaaggagtgtgctgatcttatgaaacattct
cctctaggtgcaaaatctgtaagagttcttgatcatcagaaacagaatggtgctgccgtt
caccgtataagttctctaaatggaagaagtggtttgaaggcatcagtactgaaagttgta
gaccagtggactagaccgaagtctgaaaatgagatggcaggaagacatggtcataagggg
ctctttccatatgaagtctttgctaagctgtatacaaataaaattgagttccagccttgt
ggcctcatcaacgttggcaatagctgctttgctaatgttgtcttccaatgcctgatgttc
actcctcctctgacgacatacttcctccagcaacttcattctagagcatgtacaaaaaaa
gaacagtgcttcacctgtggatttgagaagctggtcttgaaggcaaaggaagggaagtct
ccactgtcccctaatggcttgctatctcagctacagaatattggaatctttcttgggaat
ggcaaggaagaagatgcacatgaattccttaggtttgttgtcgatacaatgcagtctgtg
tgcattaaggcatctgaatatgatatgcccaagagtagcaaattagaagatacaactctt
attggtttgacatttgggggttacctccgatcaaaaattaaatgcatgaaatgtcaagta
aaatctgagctgcgtgagaaaatgatggatctaacggttgagattgatggagatattagc
accctggatgatgctttgcgtcgatttacaaggactgagatattggatggagacaataaa
tacagatgtggcagctgtaaatcctatgagagagccaaaaagaagctgaaaattacagat
cctccgaatgtccttaccattgcactaaaacgattccaggcagggaaattcgggaagctc
aataagttgatcaggtttccagaaactctagatttggctccatatgtcagcgggggaagt
gaaaaatcacatgactacaaactctatggagttattgttcacttggatataatgaatgca
gcattttctggccactatgtctgctatattagaaatcaaaataagtggtataaggctgat
gatagcacggtagtaacttcggatgttgaaaggatcatgacaaagggagcgtatatgttg
ttctacgcaaggtgcactccaatgcctccaaaattagcagtatgcaccaaaactgaagca
accaacaaaagaagcagagtgccagtacctaaggctaaagagaaaagtaccatatccatg
tcacggtctgtgtctacttcaagtcctgttttgtcttccaacacgcccggtggtcgatca
ggcaatatacagtcattttattccagtttccagaggctgcagaaaattttagaagatgac
tcggcgagtgacagttcatctctctttgacagcaactcagatgaatgctcttgtagcaca
gacagtacaagcatggacgactttgctgatttcatttttggagatcatcagggacgggcc
cacggacagtctgaggctccctcaccaacatcatcgtcttcctcgtcttctcctcccttt
acaaggcattcgccgctcagtcgttcatctctagaaacttacggaacctcaagacatcag
ttgcccttgggaggagaaaggtaa |
|---|
