KEGG   Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_495562Help
Entry
ARALYDRAFT_495562 CDS       T01578                                 

Gene name
TSB1
Definition
tryptophan synthase beta-subunit
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:aly00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    ARALYDRAFT_495562 (TSB1)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ARALYDRAFT_495562 (TSB1)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    ARALYDRAFT_495562 (TSB1)
Enzymes [BR:aly01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     ARALYDRAFT_495562 (TSB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
Unknown
AA seq 471 aa AA seqDB search
MAASGTAATFRASVSSAPSSSSSQLTHLRSSPFKALKFTPLPSSRSKSSFSVTCTIAKDP
PVLMTAGSDPTLWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAG
ILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRL
GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHS
GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWG
GKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHG
AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSR
LEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV
NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt
atggcagcctcaggcaccgctgctactttcagagcctccgtttcttctgctccttcttct
tcttcttcccaattgacccatttgagatcatcacccttcaaagctctcaaatttacgcct
ctgccatcgtctcgctccaagtcatccttctccgtcacctgcactatcgccaaagacccg
cctgttctcatgaccgccggatctgacccgaccctgtggcaacgacccgattcgttcggt
cggtttgggaagtttggtgggaagtatgtacctgagactcttatgcacgcgctctctgag
ctcgaatcggctttctatgctctcgccaccgacgatgatttccagagggagttggcaggg
atcttgaaagactatgtgggtagggaaagtcctctgtattttgcagagaggcttacggag
cattaccggcgcgagaatggcgaagggccgcttatatatttgaagagggaagacctgaac
cacacaggtgctcacaagattaacaacgctgtggctcaggctcttctcgccaagcggttg
gggaagaagagaattattgctgagacaggagcgggtcaacatggtgtggctacagccact
gtgtgtgcccgttttggtcttgagtgtattatctatatgggtgctcaagatatggagaga
caagcactcaatgtgttcagaatgcgacttcttggtgccgaggtgagaggagttcactct
ggaacagcaacattgaaagatgcaacatctgaagcgataagagattgggtgacaaatgtg
gagactacccattacatattgggatctgtggcgggtcctcatccttaccccatgatggtc
agagactttcacgctgtgattggtaaagaaacaaggagacaagcgttggagaaatggggc
gggaagccagatgtcttggtggcttgtgtcggtggtggttcaaacgctatgggactcttc
catgaatttgtaaatgacacagaggtccggatgatcggtgtggaagcagcgggattcgga
ttggacagtggcaaacacgctgctacattgacaaagggagatgtcggtgttctccatgga
gctatgagttacttgctgcaagatgatgatggacaaatcattgaaccacactcaattagt
gcaggattggactaccctggagtcggacccgagcatagtttttttaaagacatgggacgg
gctgaatactatagcataaccgacgaagaagcgttggaagcgttcaagagagtgtcgcgg
ttagaaggaatcattccagcgctggagacctcacacgcactagcttacctcgagaagctg
tgtcccacattatcggacggaacgagagtagtattgaacttcagcggaagaggagataaa
gatgttcagacagtggctaaatatcttgatgtttga

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