KEGG T01578: ARALYDRAFT

Arabidopsis lyrata (lyrate rockcress): ARALYDRAFT_905199

Entry

ARALYDRAFT_905199 CDS T01578

Definition

pectinesterase family protein

Orthology

K01051

pectinesterase [EC:3.1.1.11]

Organism

aly Arabidopsis lyrata (lyrate rockcress)

Pathway

aly00040	Pentose and glucuronate interconversions
aly00500	Starch and sucrose metabolism
aly01100	Metabolic pathways

Module

aly_M00081

Pectin degradation

Class

Metabolism; Carbohydrate metabolism; Pentose and glucuronate interconversions [PATH:aly00040]
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH:aly00500]

SSDB

Motif

Pfam:

Pectinesterase Beta_helix

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

Unknown

AA seq 317 aa
MATTRIVRVAQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFA
GISPEITVLTWNNTASKIEHHQAARVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSG
QAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYVEGSVDFIFGNSTALLEHCHI
NCKSQGFITAQSRKSSQESTGYVFLRCVITGNGQSGYMYLGRPWGPFGRVVLAYTYMDAC
IRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWSRELMDEEAGHFVHHSFVDPEQ
DRPWLCLRMGVKTPYSA

NT seq 954 nt +upstreamnt +downstreamnt
atggctacgactcgaatagtgagggttgcgcaagatggttccggagattactgctctgtt
caagacgcaattgattcggttcctttaggtaacacttgtaggactgtgattcgtctctca
ccagggatttatcggcaaccggtttacgtacccaagaggaaaaacttcattaccttcgcc
ggaatctcaccggagatcacggttcttacttggaacaatacagcttcgaagattgagcat
caccaggcggctagagttattgggactggtacgtttgggtgtgggagtgttattgttgaa
ggtgaagattttattgcagagaacattacttttgagaactctgctcctgagggttcaggg
caagctgttgctatacgagtcactgcagaccgatgtgccttttataactgtcgatttctc
ggctggcaggatacattgtatttacatcatgggaaacaatatttgaaagactgctacgtc
gagggaagcgtggatttcatatttggaaacagcactgcgctcttggaacattgccatatc
aactgcaaatctcagggttttataacagcacaaagccgaaaatcatctcaagaatctact
ggttatgtattcttaagatgtgtgataacaggtaatggtcagagtgggtatatgtatctt
ggaaggccctggggaccatttgggagggtggtccttgcttacacatacatggatgcgtgt
atcagaaatgtcggttggcataactggggaaacgcagagaacgagagaagtgcttgcttt
tatgagtacaggtgctttggtccgggtagctgttcgtctgaacgggttccgtggtcgaga
gaactgatggatgaagaagccggacactttgtgcatcacagttttgtggatccagaacag
gaccggccttggttgtgtctaagaatgggtgtgaaaacaccatattcggcgtag

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-ALY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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