KEGG   Alteromonas mediterranea DE1: amad1_05810
Entry
amad1_05810       CDS       T02340                                 
Name
(GenBank) DNA polymerase III, epsilon subunit-like protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
amaa  Alteromonas mediterranea DE1
Pathway
amaa03030  DNA replication
amaa03430  Mismatch repair
amaa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    amad1_05810
   03430 Mismatch repair
    amad1_05810
   03440 Homologous recombination
    amad1_05810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amaa03032]
    amad1_05810
   03400 DNA repair and recombination proteins [BR:amaa03400]
    amad1_05810
Enzymes [BR:amaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     amad1_05810
DNA replication proteins [BR:amaa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     amad1_05810
DNA repair and recombination proteins [BR:amaa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     amad1_05810
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AFV84680
Position
1285340..1286245
AA seq 301 aa
MTRAPAPFPLERLADIPERPEDFRLLERIPLTREPQSWPLELSPMVGDEQPMVLLDTETT
GLSADDESIIELGMVKVLYSPSAQRIVSIVDVISLYEDPSKPIPELITELTGITDEMVQG
QHIDDSLVASWLSDDPLVVAHNAQFDRPFFEKRFAALGHLSWVCSASGIDWKALGFESRK
LEYLLLRLGWFYEGHRAATDCLAMAWLFHLLPESVANLLSEADRRTVLVRAFGAPFDVKD
YLKERGYRWHDGVKGANKHWWREISEDELPQEQTYLDDLYHRGSEHAHYDYKDARNRFKA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacaagagcccctgcgccatttccgctagagcgcctcgcggatatcccagaaaggcca
gaagattttagattgctggagcgcattccattaacgcgtgaaccgcagtcctggccactt
gaactttcgcctatggtcggtgatgaacagccaatggtgctgctcgatacagagacaact
ggactgtctgccgatgatgagtccattattgagcttggtatggtaaaggtgctttacagc
ccctctgctcagcggattgtgtcgattgttgatgtgatcagcttgtatgaagatcccagc
aagccaatccccgagctgattaccgagttaaccggtatcactgatgagatggtgcaaggc
cagcacattgatgattcactggtagcgagttggttatccgatgatccgctggtggttgca
cacaatgcacagtttgatcgtcctttctttgaaaagcggtttgctgcattaggacatcta
tcttgggtctgttcagccagtggcatagattggaaggcgctgggttttgaaagtcgaaaa
cttgagtacctgctgcttcgcttaggttggttctatgaaggacaccgagctgcaaccgat
tgtttggcgatggcctggttgtttcatttgttgcccgagtccgttgcaaacttgttgtct
gaagcagacaggcgaactgtattagttcgtgcgtttggtgcgccgtttgacgtaaaggac
tatttaaaagagcgcggttaccgctggcatgacggtgttaaaggtgccaacaaacattgg
tggcgcgaaatcagcgaagacgagttgccgcaggaacaaacttacctggatgatttgtac
catcgtggctcagaacatgcccactatgactacaaagatgctcgcaatcgatttaaagct
ttgtag

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