KEGG T02340: amad1

Alteromonas macleodii AltDE1: amad1_11915

Entry

amad1_11915 CDS T02340

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

amaa Alteromonas macleodii AltDE1

Pathway

amaa03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:amaa03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 Helicase_RecD DUF2075 AAA_22 PhoH UvrD_C UvrD-helicase IstB_IS21 ResIII Flavi_DEAD PaREP1 AAA_12

Other DBs

NCBI-GI:

410862009

NCBI-GeneID:

13947145

UniProt:

K7RLW4

Position

complement(2664242..2666437)

AA seq 731 aa
MNNNQHSVSSFFDNLFGIEAIDKFVAKEFGFIEQLSQEDAFIWAGILVYLSYMQRNGHSC
IYLKDVAGTTLFEDAVALENNASAPSAKSSASEQHMALTQVMEPKVQQNKGEKAPKTGFE
VPELTPLLKIVKSALGNEQLAKLFVYDNGRLYSRRYYEFEQEVARSVVERAVLHPLHDDV
ADNVKALWPAIFPTTTTDQQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQAC
DEELKIVLAAPTGKAQQRMTESIMNSVEGLRGKVSDTALDSVPTEAVTLHRLLGLREHGV
ATKYNQHNKLSADVLIVDEASMVDLALMTRIVRALPDHARLYFIGDADQLPAVELGNVLE
QLVSDETALDFSHENPLAGGENSSNERTLGGVPSSMRQHIATLCPHLPLLPVNEQAKSYV
ATLQAPQRFKGQVARVATAIQRGDANGALAAIAQKNSGSKQGDNASQPKSADEKSINTNS
RSRLQPGVHLWPESQLGGRELQQLAKESFLPLFEAQSAEEALNRLNYVRWLTPIRKGAMG
VEGLNNLVFDAIKHKIRRREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSTGKLYAWF
YQDTYVEGQQAGKSLNDSSNNSSAQNLGQQKQALRSISLSRVPQFETVYAMTIHKSQGSE
FNHVVLILPKPESEKAANLFHRGLVYTGLTRAKDGCLIISDSNTFSGMVATVDKRYSGLS
SAISRCAEKVL

NT seq 2196 nt +upstreamnt +downstreamnt
atgaataacaatcaacattcagtgtcgtcgtttttcgataacttatttggcattgaagcc
atcgacaaattcgtggcaaaagaatttggctttatagagcaactgtctcaagaggacgcg
tttatatgggcgggaatattggtatacctgtcgtatatgcagcgaaatggacatagctgt
atctatttgaaagacgtggcgggaaccacgctttttgaagacgcggttgccttagaaaat
aatgcgtcagcgccttcagcaaaaagcagtgccagtgagcaacatatggctctcactcaa
gtcatggagcctaaggtacagcaaaataaaggggaaaaagcgcctaaaacaggctttgag
gtaccagagttaacgcctttgcttaaaatagtgaaaagcgcccttggcaacgagcaatta
gccaagcttttcgtatacgacaatggcagactttatagccgccggtactatgaatttgaa
caagaagtggcgagaagcgtagtagaacgcgcagtacttcaccctttacatgatgacgta
gccgacaacgtaaaagccttgtggcctgctatatttcctaccaccactacagatcaacaa
gactggcagcaaatagcggtagccaaaagtttaatgcagcgattttgcgtaataaacggc
gggccgggtacaggtaaaacctacaccgtgctgcgtttattacttgcgctacaggcctgc
gatgaagagctaaaaattgtactggcagcccctacgggcaaagcgcagcagcgtatgact
gagtctatcatgaatagcgtagaagggcttcgcggtaaggtaagcgataccgcgcttgat
agtgtgcctacagaggccgttaccctgcataggttgttaggactcagagaacatggcgtt
gcgacaaagtacaatcaacacaacaaactatctgccgacgtacttattgttgatgaagcc
agtatggttgatttagccctaatgacgcgcatagttcgggcgttacctgaccacgcgcgg
ttatatttcattggtgatgctgatcagcttccagcggttgagctaggcaatgtgcttgaa
cagttagttagcgatgaaactgcgctggatttttctcacgaaaacccattagccggcggt
gaaaacagtagtaatgagcgtacacttggtggtgtaccttcttcaatgcgacagcatatt
gccacgctttgcccgcatttgcctctgttacctgtaaatgaacaggcaaaaagctacgta
gcaacgttgcaagcgccgcaacgctttaaagggcaggtggctcgggtggcaacggcaatt
cagcgcggcgatgcgaacggtgcgcttgctgctattgcacaaaagaatagtggcagtaag
caaggcgataatgcttcacagccgaaaagcgctgatgaaaaaagcatcaatactaatagc
cgctcacgtttacagcctggtgttcacttatggccagaaagtcaacttggtggtcgtgag
ctacagcagctagcgaaagagagcttcttacccctatttgaagcccaaagtgcagaggag
gcgctcaaccgccttaattacgttaggtggttaacccctatacgtaaaggcgccatgggg
gtggaaggtttgaataacttggtgttcgatgccattaagcacaagatcaggcgacgtgag
ggacacttctatcaaggtcagcctattatgattgtaaaaaatcatcatccacagcgtttg
tccaacggcgaggtaggtgtaatttggccggacagcacgggcaaattgtatgcgtggttc
taccaggatacgtatgtcgaaggacaacaagcaggcaagagcttgaacgatagctcaaat
aacagtagcgcgcaaaatctagggcaacagaagcaagcgctacgcagcatatcgctatca
agagtaccgcagtttgaaaccgtgtatgccatgactattcacaagtctcagggctctgag
tttaatcacgttgtgcttattttgcccaaacccgaaagcgaaaaagccgctaacctgttt
caccgggggttagtctatacagggttaacgcgggcaaaagacgggtgcttaattatttcc
gatagcaatacattcagcggcatggtggcaacggttgataaacgctattcaggcttatct
agcgcaataagccgatgcgctgaaaaagtactctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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