KEGG   Alteromonas macleodii ATCC 27126: MASE_17205
Entry
MASE_17205        CDS       T02246                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
amac  Alteromonas macleodii ATCC 27126
Pathway
amac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MASE_17205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amac03400]
    MASE_17205
Enzymes [BR:amac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MASE_17205
DNA repair and recombination proteins [BR:amac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MASE_17205
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C Helicase_C ResIII PriA_CRR PriA-like_WH AAA_30 A2L_zn_ribbon AAA_19 eIF-5_eIF-2B
Other DBs
NCBI-ProteinID: AFS38931
Position
complement(4036154..4038343)
AA seq 729 aa
MAFIQVAVPVPLRQLFTYTHDNALSAGVRVVVPFGPRKLVGVVVETLHKPESDIENSNKL
KAIESVLDDSPIIDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAAPTPQDMLML
TEEGKQTTADTLSRAPKQQACFTAMAGGALLASQARKQYGAPAVKALVEKSLISIEEVAP
EFKSGSWLASLSVSEKPIPDTEQSVAIAALNRQQGNFAVSLLEGVTGSGKTEVYLQAIEP
LLRDGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKERLQVWQRAKAGELGII
IGTRSAIFTPLHNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGSATPA
LETLNNALSGRYAHLQLTKRAGGAKSTHQHVLDARDQPIHYGISQGLLTIMRQHINAGNQ
VLVFVNRRGYAPALLCHHCGETVMCKRCDRPYTVHKAQNRLQCHHCGGMRSMPSNCEACH
HNELVTAGTGTEQVEQGLASLFPGVKQVRIDSDTVRGKDKLHQTLDAINRQEYQLLVGTQ
ILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTHN
PHHPLLQDLVHNGYGHFARHALMERKAAGLPPFISQFVIRAEATDSSLAYRFLQDSKQVF
LQQHAIELNGPFPCLIEKRQGRFRFMLVCSHEKRAPLHNALRLALPFLQALPQAMKVRWS
IDIDPTDFS
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggcctttatccaagttgccgtgccagtgccactgcgccaacttttcacgtatacccac
gataacgcactaagtgcgggtgtaagagtggttgtgcctttcggtccgcgcaaacttgtg
ggcgtagttgttgaaaccctacacaaacctgaaagcgacattgaaaactccaacaagcta
aaagctattgagtcggtactggacgatagccctattatagatggggtgttgttgaaaatg
gcccaatggctgtggcagtactatcatcatgcgccgggtgaagtgttgcacgccatgctg
cctgtattattgcgcaaaggcgagtcagcagcgccaacacctcaagacatgttaatgctt
accgaagaaggtaagcaaacgactgcagacacgttatcgcgggcgcctaaacaacaagcc
tgttttactgcaatggctggtggtgcattattagcgtcccaagcgcgcaagcagtatggc
gcacctgcggtcaaagcgctcgtcgaaaagtcattgataagcattgaagaagtcgcgcct
gaatttaagtcaggcagttggcttgcctcgttatcggtgtctgaaaagccaattccagat
actgagcagtcggttgccattgccgcgctaaaccgtcagcagggcaatttcgctgtaagt
ttgcttgaaggggttaccggtagcggtaaaacggaagtgtaccttcaagccatcgaaccc
ttactgcgcgacggaaaacaagtgcttatacttgtgccagaaattgggcttacgccgcaa
acggtgtcacgctttgaaaagcgctttggtattgcagtgggcgttttacactctcagctt
tctgataaagaacggctacaggtgtggcagcgagcaaaagcaggtgaactcgggataatc
atcggtacccgttcagctattttcactccgctgcacaaccccggcatgctgattgtggat
gaagagcacgacgagtcttttaaacaacaagatggacttcgctatcacgcccgtgaccta
gcagctatgcgggctaagcagcacaatattcctcttttattaggcagcgccacgcccgca
ctcgaaacacttaataatgcgctaagcggtcgctatgcccatttgcagttaactaagcga
gcgggaggtgcgaaaagcacgcatcagcatgtgttggacgcgcgtgaccaacccattcac
tacggtatttcgcaaggcttgctaacaataatgcgccagcatatcaacgcgggaaatcag
gtattggtgtttgtgaatcgcagaggctatgcgccagcgctgctttgccatcactgcggc
gaaaccgtcatgtgtaagcgttgtgaccgtccttatactgtgcataaagcgcagaaccgt
ttacagtgtcatcactgcggcggtatgcgctcaatgccatcaaactgcgaagcgtgccat
cacaatgaattagttacggcgggtacgggaacagagcaagttgagcaagggcttgcaagt
ttatttcccggtgttaaacaggtacgaatagacagtgataccgtgcggggcaaagataaa
ctgcaccaaacactggatgcaataaaccgccaagagtaccagcttctggtaggtacccaa
atactatcaaaaggtcaccattttccgcatgtaaccttggtggcggtgctagattgtgat
ggtgcactttttagtgccgattttagagcaccagaaaagctcgctcagcttgtaactcag
cttgctggaagagcagggcgcgccagtaaacctggtgagatgtggcttcaaacacacaac
cctcatcaccctttgctacaagatttagtgcacaatggctatgggcatttcgccagacac
gctttaatggagcgaaaagcggcagggcttcccccatttattagccagtttgtcattcgc
gcagaagcgaccgacagcagtttggcctatcgctttttacaagacagtaagcaagtattt
ctccagcagcatgccattgagctaaatggcccgtttccttgtttgattgaaaagcggcaa
ggcaggtttcggtttatgctggtatgcagccatgaaaagcgtgcgccgcttcacaatgcg
ctgcgtttggcgctgccatttttacaggcgttgccacaggcaatgaaggtaaggtggtcg
atagatattgatcctaccgatttcagttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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