KEGG   Alteromonas macleodii Ionian Sea UM4b: I636_00270Help
Entry
I636_00270        CDS       T02723                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
amad  Alteromonas macleodii Ionian Sea UM4b
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:amad00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    I636_00270
Enzymes [BR:amad01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     I636_00270
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     I636_00270
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
62022..62831
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRLGVSPHLIGNTITRVVVRERRMRWPIPQEVAKVEGQKVTAVKRRAKYLL
IETAQGTLILHLGMSGKLRVIDASTPVIKHDHVDIVLSTGKCLRFNDPRRFGAVLYQAPD
THIPMLDNLGPEPLTDDFDDTRLFTLSRNRKGPVKNFIMDNAIVVGVGNIYANEALFLAG
IDPRRAAGNISAARYKSLTATIKQVLAKAIEQGGTTLKDFAQTDGKPGYFAQHLNVYGRK
GEPCEACGKAIESKVIGQRNTFFCTRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaagttgaagtaagccgtttgggcgtctcaccacatcttattggc
aacacgattacccgtgttgtggttcgcgagcgaagaatgcgttggcctattccacaagag
gtggccaaggttgaggggcaaaaggtcacggccgtaaagcgccgcgctaaatatctattg
attgagacagcgcagggtacgctaattttacacttgggcatgtcgggtaaactacgggtt
atcgacgcttctaccccagtgattaagcacgaccatgtggacattgtgcttagcacgggt
aaatgtctgcgctttaacgaccctagacgcttcggtgccgtgctgtatcaagcgccagat
acacacattcccatgcttgataatcttgggcctgagccccttacagacgattttgacgat
acgcgcttatttaccctgtcacgcaaccgcaaaggcccagtgaaaaacttcattatggat
aatgctattgtggtgggggttggaaatatctatgcaaacgaagcgctatttttagcgggt
atcgatccaaggcgtgccgccggtaatatcagtgcagcccgctacaagtcgttaaccgct
acaataaagcaagtgttggcaaaagccattgaacagggcggcactacgttaaaagatttt
gcgcaaacagatggcaagcctggctatttcgcccaacaccttaatgtctatggccgaaaa
ggagagccatgcgaggcgtgtggtaaggcgatagaaagcaaagtaatcgggcagcgcaat
accttcttttgtactcgctgccaacgttaa

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