KEGG T02721: I876

Alteromonas mediterranea U7: I876_10815

Entry

I876_10815        CDS       T02721

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

amae Alteromonas mediterranea U7

Brite

KEGG Orthology (KO) [BR:amae00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amae03032]
    I876_10815
   03400 DNA repair and recombination proteins [BR:amae03400]
    I876_10815
Enzymes [BR:amae01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     I876_10815
DNA replication proteins [BR:amae03032]
Prokaryotic type
  DNA Topoisomerases
   I876_10815
DNA repair and recombination proteins [BR:amae03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      I876_10815

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C PLC-beta_C Ins134_P3_kin_N

Other DBs

NCBI-ProteinID:

AGP90018

Position

complement(2452331..2455045)

AA seq 904 aa
MSDNAKEILPVNIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEYIPEVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCVALIQDPSITIDDLMTHIPGPDFPTAAMISGRKGIEDAYRTGRGKI
YLRAKAEIETDANGKETIVVNEIPYQVNKARLIEKIAELVKEKRIEGVSALRDESDKDGM
RIVIEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKETLECFILHRREV
VTRRTVFELRKARDRAHILEGLAIALANIDPIIELIKASQSPADAKKSLVAQGWDLGDVA
QMLERAGDDAARPDWLMPEFGIRDGKYYLTEQQAQAILDLRLHKLTGLEHEKILEEYKQL
LELIAELLHILNSPERLMEVIQEELEKIRDEFGDERRTEITAASHDIDIEDLIEQEDVVV
TLSREGYVKYQKLTDYEAQRRGGRGKSATKMKDEDIIERLLVANTHDHILCFSTRGRLYW
LKVYQLPFASRNARGRPIVNILPLEDNERITAILPIKEFEEGKYVLMATANGTVKKTDLS
LYSRPRSSGIIAVNLNEGDELIGVDITHGDDDIMLFSDAGKVVRFNEKLRDSETGEVKRD
PETGEELLALRPMGRTATGVRGIRLQDGQKVVSLIVPKGDGPVLTATENGFGKRTPLEDY
PAKSRATQGVVSIKVSERNGKVVGAVQVDDTNEIMLISDQGTLVRTRVSEVSVVGRNTQG
VRLIRTVEGEHVVGLQRIEEVEELQAFDEDGNLIIPEDASEQAETAVQEQDNAAEDGEGS
TTEE

NT seq 2715 nt +upstreamnt +downstreamnt
atgtctgataacgctaaagaaatcctccccgttaatattgaggaagagttaaagaactcc
tacctcgattacgcgatgagcgttattgtcgggcgagccttgcctgatgtaagagatggc
ttgaagccagtgcaccgtcgtgtgctgttcgcaatgaacgaacttaaaaacgactttaac
aagccatacaaaaaatctgcccgtgtagtaggtgacgtaattggtaaatatcaccctcac
ggtgactctgcagtttacgacactattgttcgtatggctcagccgttctcacttcgctac
atgctcgtagatgggcaaggtaacttcggctctgtcgacggcgattctgcagcggcaatg
cgttacaccgaagttcgcatggctaaaatcgctcacgaacttcttgccgacttagataag
gaaaccgttgattttgtgcctaactatgacggcacagaatatattcctgaggtattacct
accaaagtaccaaacctcctagtaaacggttcttcaggtatcgcagttggtatggcaacg
aacattccaccgcataacctcactgaagtgattaatggctgtgttgcgctaatccaagac
ccatcaattacgattgatgacctgatgacgcatataccggggccagatttcccaacagcg
gcaatgatcagcggtcgtaaaggcattgaagatgcgtaccgcaccggtcgtggtaaaatt
taccttcgcgctaaggcggaaatagagaccgatgcaaacggcaaagaaactattgttgtt
aacgaaattccttaccaggtaaataaagcacgtcttatcgaaaagattgctgaactggta
aaagagaagcgtatagaaggtgtttctgcactgcgcgacgagtctgataaagacggtatg
cgtattgttattgaggttaaacgcaacgaatcagcagaagtactgctaaatcatttatat
gccaatacccagcttcaaacggtatttggtattaatatggttgcgttagacaacggtcag
ccaaaagtatttaaccttaaagaaaccttagaatgctttattcttcaccgccgtgaagtg
gttacccgccgcactgtatttgaactgcgtaaagctcgtgaccgtgcccacatccttgaa
ggtttggccatcgcgcttgccaacatcgacccaattatcgagttgattaaagcatcacaa
agcccagcagatgcgaagaagtcacttgttgcgcaaggttgggacttaggtgatgtagcg
caaatgctggagcgcgccggtgatgacgctgcacgccctgactggttaatgcctgagttt
ggtattcgcgacggcaagtactacttaactgagcaacaagcgcaagctattcttgacctt
cgtttacacaagctaacgggtcttgagcatgagaagatccttgaagaatacaagcagctt
cttgaacttatcgctgaattacttcacattctaaatagccctgagcgtttgatggaagtc
attcaagaagagcttgaaaagatacgtgacgagttcggcgacgagcgtcgtaccgaaatt
accgctgcaagtcacgacatagatattgaagaccttattgagcaggaagacgttgttgtt
acgctttctcgcgaaggctatgttaaatatcagaagctgacggattacgaagcgcaacgc
cgtggtgggcgaggcaaatcggctactaagatgaaagatgaagatatcatcgaacgacta
ctcgtagccaatacccacgatcatattttgtgcttctcaacccgtggtcgcttatattgg
ttgaaagtgtatcaattgccatttgcaagccgaaatgcgcgcggtcgtccaattgtgaat
attcttccattagaagataacgagcgtattaccgctattcttccaattaaagagtttgaa
gaaggcaaatatgtactgatggcaacagccaacggtacagtgaagaaaaccgacctaagc
ctatattctcgcccacgttcaagcggtattattgccgtaaacctgaatgaaggtgatgag
cttattggtgttgatatcacccatggtgacgatgacatcatgctgttttctgacgcaggt
aaagtggttcgctttaacgaaaagcttcgcgacagtgaaacgggcgaagtgaaacgcgat
cctgaaaccggtgaagagctattagcactacgtccaatgggacgtaccgcaaccggtgtt
cgcggtattcgtcttcaggacggtcaaaaagtggtatcactgattgttccaaaaggtgat
ggacctgttttgactgcgacggaaaacggatttggtaagcgtacgccacttgaagattac
ccagcgaagagccgtgcaacacagggtgttgtatcaattaaggtgtctgagcgtaacggt
aaagtggttggtgcggtccaagtggacgataccaatgaaattatgcttattagtgatcag
ggtacgttagtgcgtactcgtgttagcgaagtgtcagtagtaggtcgaaacacgcaaggt
gtgcgcttaatacgtactgttgaaggcgagcatgttgtaggtttacaacgcattgaagaa
gtagaagagttacaagcgtttgatgaagacggtaacttgattattcctgaagatgcatca
gaacaagcagaaactgctgttcaagagcaagataacgccgcagaagacggtgaaggctca
acgacagaagagtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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