KEGG   Alteromonas mediterranea MED64: I533_12385
Entry
I533_12385        CDS       T02958                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
amag  Alteromonas mediterranea MED64
Pathway
amag03030  DNA replication
amag03430  Mismatch repair
amag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I533_12385
   03430 Mismatch repair
    I533_12385
   03440 Homologous recombination
    I533_12385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amag03032]
    I533_12385
   03400 DNA repair and recombination proteins [BR:amag03400]
    I533_12385
Enzymes [BR:amag01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I533_12385
DNA replication proteins [BR:amag03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I533_12385
DNA repair and recombination proteins [BR:amag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I533_12385
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA AAA_14 AAA_22 RuvB_N AAA_16 AAA_2 AAA_18 AAA_5 Rad17 ResIII AAA_19 AAA_30 DNA_pol3_delta AAA_7 nSTAND3 AAA_24 PIF1
Other DBs
NCBI-ProteinID: AGP82437
Position
complement(2786968..2789742)
AA seq 924 aa
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR
EQIVGQLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDM
LGLMDKNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE
ACKLETTSAKAIFQLAKTISAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMAFAP
NAPIAETVDEIENGRSEHNLPVNHASPSGGPGNVSKQEEPPLSETSATIDQGEAPIEAQP
EHEPTSPKTPPQSSIADASTDLPSSAPAETVANEEEPTAVSNTQTNTAAETDIAFKANLS
SASASEAQEPQSNASVEDEEASPVAQYFDEPPLDAYMDDMPPLQDESGHYELDTPESERI
VEPSPSAEEQLTSTADMLALRQKLKQKKAQDADAKSSSAANAKTQSASEIQARFTRSKTD
AVSTVADEKNSPEPINSPELSNSPELSNSPEPINSPTLEAAPASEQSQDSITDHQSANAL
NDGSDTQLLGGSEQASTDADFADNNDSGHDAFALDDFEEDMPFSNDESDANYNPNPQVED
APPWDTGKSVQDGHSVEPSLTPVPRANELESKEHGFYERGENAGERSFTRDALDFDTPLS
TTYEGSLHAYLSDGSKLTHASQIDDWSNLVEQMPVAGLLKQLVLHAAFSRNGNHVSLEIH
HSQTHLLKDSAKKQLVDAIHHGLGENVEVSITLGEPLSTPFALQQEIHAMRHAHAHSVIK
TDETIQALLSTFDGSVLTDTVKAR
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgagttatcaggtactggcaaggaagtggcgaccaggcaagttcagtgaacttgtaggt
caagagcacgtagtgtctgctatttcaaatgcgctcgataacgaccgtttacaccatgct
tatctttttacaggtacgcgtggtgttggtaaaacgaccattgctcgtattttttcaaaa
agccttaactgtgaggaagggcaaggggcaaacccttgcggtcaatgcaatacctgtaaa
gaaatagagcagggtaattacgttgacttgcttgaaattgacgcggcatcaagaaccaaa
gtggaagacactcgagagcttcttgataacgtacaatacaagccaacccgcgggcgctac
aaagtgtaccttatcgatgaggtacacatgctttctaaacatagctttaatgcgctgtta
aaaacgctagaagagccgcctccgcatgtaaagttcttgttggcgacaacagatccacaa
aaactccccatcaccattttatcgcgatgcttgcagtttaacctgaaagcgatgtcgcga
gagcaaatagtcggtcagcttactcatatacttcagcaagagcagcttgcttttgaggcg
cctgctttggctttgctggctagggcggcacagggcagtatgcgtgatgcgctgagttta
accgaccaagcaattgctcagggtgggaatcaagtaatggcgtcggttgttaccgacatg
cttggcctgatggacaaaaaccagcttttgaaagtaattcatgcggtggtgaataaaagc
cctgccgaggttttgcagttggttaacgacattgctgaacaagcacctgattatgacaat
gtgcatagtgagttggcgagcttgcttcaccaaattgcgttgacgcaatgggtgccagaa
gcctgcaagcttgaaaccacgtcggcaaaagcgatatttcaattagccaaaactatttct
gcagaacaagtacagctactttatcaaattgcattgcaaggcagaaaagatttacctttt
gctgccgatggtaaaagcgcgtttgaaatgacgctaatgcgtatgatggcctttgcacca
aacgcgccaatagctgaaaccgtagacgagatagaaaacgggaggagtgagcataattta
cctgtaaaccatgcttctcccagtggtggcccgggaaacgttagtaagcaggaggaaccg
cctttaagcgaaacttctgcaacgatagaccaaggcgaagcgccaattgaagcgcagcca
gagcatgaacctacttcacctaagacaccgccacagagttctatagctgatgcgtcgacg
gatcttccgtcatcagctcccgctgaaaccgtagcgaacgaagaagagcccaccgcggtt
tctaatacgcaaacaaatacggccgctgaaactgatatagcgtttaaagcgaatctttcc
agcgccagtgcatctgaggcacaagagcctcagagcaatgcatcagttgaagacgaagaa
gcaagccctgttgctcaatattttgatgaaccaccgctagacgcttatatggatgacatg
ccacctctacaggatgagagtggccattacgaattggacacgcccgaaagcgagcgtata
gttgagccatcgccgtcagcagaagaacagttaacctctaccgccgatatgctggcattg
cgccaaaaactcaaacaaaaaaaagcgcaagatgctgacgcaaaaagtagtagtgcggct
aatgctaaaacgcaaagcgctagtgaaatacaagcgcggtttactagaagtaaaacggac
gctgttagcacagtggctgatgaaaagaacagccctgagccgattaacagccctgagcta
agtaacagccctgagctaagtaacagccctgaacccattaacagtcctacgcttgaagcc
gctccagcgtccgaacaaagccaagacagtataactgaccatcagagtgccaatgcgctt
aacgacggtagcgatacacaattacttggtggtagtgaacaggcaagcacagatgctgac
tttgcagataacaatgattccggtcatgatgcctttgccctagatgattttgaagaggat
atgcctttttcaaatgatgagagtgacgcaaattataaccctaacccgcaggtagaagat
gctccgccttgggatacagggaagtcagttcaagacggacattcagttgagccgtcactt
acgcctgttcctcgcgccaatgaactcgagagcaaggaacacggcttttatgagcgtggt
gaaaatgccggtgaacgttcatttactagggacgcattagattttgatacgcccttaagt
acaacttatgagggtagtttacacgcttatctttccgatggaagtaagctgactcacgcc
agtcaaattgatgactggagcaacttggttgagcaaatgccggtagcaggcttgcttaag
cagttggtattacatgcggcattttcgcgaaatggcaatcacgtgtcccttgaaattcac
catagtcagacgcatttattaaaagacagtgctaaaaagcagttagttgatgcaattcat
cacggcctgggtgaaaacgtagaagttagtattacgttgggtgaaccgttatccacgccg
tttgcattacagcaagaaattcatgccatgcgacacgcgcatgcgcactcggttattaaa
accgatgagacgattcaagcattgctatcgactttcgatgggtcagtgctaaccgatacg
gttaaagcgcgatag

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