KEGG   Alteromonas mediterranea U4: I607_00950
Entry
I607_00950        CDS       T02720                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
amal  Alteromonas mediterranea U4
Pathway
amal00300  Lysine biosynthesis
amal00470  D-Amino acid metabolism
amal01100  Metabolic pathways
amal01110  Biosynthesis of secondary metabolites
amal01120  Microbial metabolism in diverse environments
amal01230  Biosynthesis of amino acids
Module
amal_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:amal00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    I607_00950
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    I607_00950
Enzymes [BR:amal01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     I607_00950
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: AGP84002
Position
complement(210918..212168)
AA seq 416 aa
MDYFAYSQGQLHAEEVAVSDIAAQHGTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVK
ANSNIGVLSVLAKLGSGFDIVSAGELARVIEAGGDASKVVFSGVGKKHDEIRYALEQGIM
CFNVESEPELHRINEVAGEVGVKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALA
TYELAASLPNLNVVGMDCHIGSQLTEIGPFVDALERLLVLIDELAERNIIIEHLDVGGGL
GVTYNDEEPPHPKAYAQAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEGEEKS
FAIVDAAMNDLLRPALYSAWQKIIPVKEESTAKLHTYDVVGPVCETGDFIGKDRELAIEP
TDLLAVRSAGAYGFVMASNYNSRCRPAEIMVDGDKAIVVREREKQKDLWQGEHKLP
NT seq 1251 nt   +upstreamnt  +downstreamnt
gtggattatttcgcctacagccaaggtcagcttcacgctgaagaggtcgctgtttctgat
attgcagctcagcacggaacgccggtttatatttattcaagagccacgttagaacgtcat
tggcacgcttttaacgatgccattggtgagcaccctcacctggtttgttatgccgttaaa
gctaattctaatattggcgtattaagtgtattagcgaagctgggttcaggttttgatatt
gtttcagccggtgaactcgcccgcgttatagaagccggtggcgacgctagcaaagtggtt
ttttctggcgtaggcaaaaagcacgacgaaattcgctatgcgttagagcaaggcattatg
tgctttaacgtagagtcagagcctgaattacaccgcattaatgaagtggccggtgaagta
ggcgtaaaagcccctatttctttgcgtattaacccagatgtagatgctaagacacaccct
tacatctcaactggcttaaaggccaataaatttggaatagcgcgcgagcgcgcactggcg
acttatgaactagcggcatcgcttccaaatttgaatgtagtgggaatggattgccacatt
ggctctcagttaactgaaataggtcccttcgtagatgcgttagagcgtttgcttgtgctt
attgatgagcttgctgagcgcaacatcatcatcgaacatttagatgtgggcggcggcctg
ggcgtgacttataacgatgaagagccaccccaccctaaagcctatgcacaagccatggct
gaaaaaatggtcggcagagagaacctcaaacttatccttgagccgggccgcgctattgcc
gccaacgctggtattttagtcaccgaggtcgagttcatcaaagaaggcgaagagaaaagc
tttgctattgtcgatgcggcaatgaacgatctgctgcgtccagcgctttactcagcgtgg
caaaagattatcccggtaaaagaagaaagcaccgcaaaactacacacctacgatgtggta
ggcccagtgtgcgaaaccggtgactttataggcaaagaccgtgaattagccattgagccc
accgatttacttgcagttcgcagtgccggtgcctatggttttgttatggcgtcgaactac
aacagccgctgccgcccagcggagattatggtagatggtgacaaagccattgtggttcgc
gaaagagaaaaacaaaaagatctctggcaaggtgagcataaacttccgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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