KEGG   Alteromonas mediterranea U4: I607_03060
Entry
I607_03060        CDS       T02720                                 
Name
(GenBank) outer membrane channel protein
  KO
K12340  outer membrane protein
Organism
amal  Alteromonas mediterranea U4
Pathway
amal01501  beta-Lactam resistance
amal01503  Cationic antimicrobial peptide (CAMP) resistance
amal02020  Two-component system
amal03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amal00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I607_03060
  09132 Signal transduction
   02020 Two-component system
    I607_03060
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    I607_03060
   01503 Cationic antimicrobial peptide (CAMP) resistance
    I607_03060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:amal02000]
    I607_03060
   02044 Secretion system [BR:amal02044]
    I607_03060
   01504 Antimicrobial resistance genes [BR:amal01504]
    I607_03060
Transporters [BR:amal02000]
 Other transporters
  Pores ion channels [TC:1]
   I607_03060
Secretion system [BR:amal02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   I607_03060
  RTX toxin transporter
   I607_03060
  Multiple protein transporter
   I607_03060
  RaxAB-RaxC type I secretion system protein
   I607_03060
Antimicrobial resistance genes [BR:amal01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    I607_03060
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    I607_03060
SSDB
Motif
Pfam: OEP Fibrinogen_C
Other DBs
NCBI-ProteinID: AGP84422
Position
complement(677664..679052)
AA seq 462 aa
MKRTLLSLVIGVSMTTGALADDLMQVYQQALANDPLVNQAKAQRDAAFEGISLSRASLLP
QISGSVGYTHSESERFQLLGPDTIFTTDTTVDTTDYGLSLSMSLYDHANWLGLDRAEKVA
EQSDAQLAASMQDVIVRTVTAYFDVLRARDNVEFVGAEKRAIERQLEQTRQRFEVGLTAI
TDVHEAQANYDSTVAQEIQAKNQLEFALEALRVITGKYHDRLFGLNTENFSATMPVPETV
DSWLETAQDQNLALLVDRLAMDVAKEDIAIARSGHLPTLSLSGSYGRSKDDVDAEILNDD
GSTTPFGYETPYLDNQSIGITLNVPIYQGGSVSAQTSQAKYNYVAASQAAEQTYRQTVQS
VRSSFNNVKASISTIRALEQSVVSADSALKATEAGFDVGTRTIVDVLDSTRNLFDARRNL
AGARYDFIQSVITLKQAAGTLTGEDVAMINRGLKPVTNNDNG
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgaaacgaacacttctgtcgctagttatcggtgtttcgatgacaactggtgcgctagcc
gatgacctaatgcaggtatatcaacaagcactggcaaacgatccactggtaaaccaggcg
aaagcgcaacgtgatgctgcgttcgaagggatcagtcttagccgcgcaagcctactaccc
caaatctctggctctgtgggttatacgcactcggagtctgaacgctttcagctgcttggt
ccagatacgatcttcacaacagataccactgtcgacaccactgattacggactttcctta
tcaatgtctttgtatgaccacgcgaactggttgggtttagaccgcgcagagaaagtggca
gagcaaagcgatgcgcaacttgcggctagtatgcaagatgttatcgtgcgtacggttacc
gcgtatttcgatgtgttgcgtgcccgtgacaacgtagagtttgttggtgctgaaaaacgc
gccattgagcgtcagcttgagcaaacacgccagcgctttgaagtaggcctaacggcaatt
actgacgtgcatgaagcgcaagcaaactacgacagcacagtagctcaggaaatccaagcg
aaaaaccagcttgagtttgcccttgaagcacttcgtgttattaccggcaagtaccacgat
cgtcttttcggtctaaatacagagaatttctctgcgactatgccagtaccagaaactgta
gacagctggctagagaccgcgcaggaccaaaatcttgctctattagttgaccgtttggcc
atggacgtggcaaaagaagatattgctattgcgcgctctggtcacttgccaacattatca
ctgtctggcagctacggtcgctcgaaagatgatgttgatgctgaaatattaaatgacgac
ggctctaccacaccgtttgggtatgaaacgccgtacttggataaccaatcaattggcatt
acgctgaacgttccaatctatcaaggcggtagcgtaagcgcgcaaacgtcgcaagcgaag
tacaactacgtagcggccagccaagccgcagagcagacgtatcgtcaaacggtacagtca
gttcgtagctcgtttaataacgtaaaagcgtctatctcgactattcgtgcgctagaacaa
tccgttgtgtcggcagacagtgcactcaaagcaactgaagcagggttcgatgtaggcaca
cgtactatcgttgacgtactcgacagcacgcgtaacttattcgacgcacgccgtaaccta
gccggtgctcgatacgactttattcagtctgtaattacgcttaaacaagcagcaggtacg
ttgacaggtgaagacgtagcgatgataaatcgcggccttaagcccgttacgaacaatgac
aacggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (7)   
   KEGG PATHWAY (4)   
   KEGG MODULE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system