KEGG   Alteromonas mediterranea U4: I607_06155
Entry
I607_06155        CDS       T02720                                 
Name
(GenBank) two-component system response regulator
  KO
K07715  two-component system, NtrC family, response regulator GlrR
Organism
amal  Alteromonas mediterranea U4
Pathway
amal02020  Two-component system
amal02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    I607_06155
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I607_06155
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:amal02022]
    I607_06155
Two-component system [BR:amal02022]
 NtrC family
  GlrK-GlrR (amino sugar metabolism)
   I607_06155
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_16 AAA AAA_2 Mg_chelatase HTH_8 AAA_3 AAA_assoc_2 AAA_19 nSTAND3 AfaD TIP49 T2SSE MCM PK_C
Other DBs
NCBI-ProteinID: AGP85033
Position
1371946..1373286
AA seq 446 aa
MSEKASSNPNLLLVDDDKSLLRLLTIRLEGEGYDVTAVEDGQSALRKLQNDSFDVVLSDL
RMPGLDGLSLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLL
QKALSQSQAAQPGDWAKDIITRSPEMLNVLDQAFRIAKREVSVLISGASGTGKELLANAI
HKASNRSDKPFVAINCGALPENLLESELFGHAKGAFTGAVAAHPGLFREADGGTLFLDEI
GDMPMTLQVKLLRALQERQIRPVGSSKHVDIDVRIISATHKDLHKEMEESTFREDLYYRL
NVVNLKLPSLKSRSEDIPLLARSLLQQSAQRHGVNVSQFSDDAMQQLVTSSWPGNVRQLV
NVVEQCVALTQTPVIPLHLVEQALSATKQSWPTLTEARDAFEQQYLHKLLKMTDGNVTRA
AELAGRNRTDMHKLMKKHELDAADFR
NT seq 1341 nt   +upstreamnt  +downstreamnt
gtgagcgaaaaggcgagtagtaaccctaacttattgttggttgatgatgataaaagctta
ttgcgcttattaaccattcgcttagaaggcgaaggttatgacgtcacggcagtcgaagat
ggccagtctgccctacgcaaactgcaaaatgacagctttgatgtcgtgttaagcgacctg
cgtatgccgggtcttgatgggttaagcctgtttgaagaaataatgggaattaggaaagat
atccccgttattctaatgacagctcacggcaccattgccgatgcagtggcggcaacgcag
cgcggcgtttttggtttcttacctaagcctgtggatcacgacgaactacgcactttactt
caaaaagcgttaagccagtctcaagctgcgcagccgggagactgggcgaaagatatcatt
actcgttctccagaaatgctcaatgtgttagaccaagcttttcgtatagctaaacgggaa
gtgtcagtgctcataagcggagctagcggcacgggaaaagagctgttagccaatgctatt
cacaaggctagcaatagaagcgataaaccatttgttgccattaactgtggcgcattgcca
gaaaaccttcttgaatcagaattattcggtcacgcaaaaggcgcgttcactggagccgtt
gccgctcatccagggttatttagggaagccgacggcggcactttatttttagacgaaatt
ggcgatatgcccatgacgcttcaagtgaagttgttaagagcgctccaagaacgtcaaata
cgcccagtgggcagtagtaaacatgtcgacatcgatgtgcgtatcatttcagccacccac
aaagacctgcacaaggaaatggaagaaagcacgtttagagaagacttgtattaccgctta
aacgtggtgaatttaaaacttccgtctctaaaatctcgtagcgaagacattccgctgttg
gcgcgttctttattacagcaaagtgcgcagcgccacggtgttaacgttagtcagttttct
gatgacgctatgcagcagctggtaacttcatcttggccgggtaacgtacgtcaattagtc
aatgttgtagagcagtgtgtagcattaacgcaaacgccggtgatcccgcttcatcttgtt
gagcaggcactgtctgctaccaagcaaagctggccaacactaaccgaagcgagagatgcc
ttcgagcagcagtacctacataagttattaaaaatgactgacggtaacgtaacgcgggcc
gctgaactggctggtagaaaccgcacagatatgcataagcttatgaaaaaacatgagtta
gatgcggccgatttcaggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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