KEGG   Alteromonas mediterranea U4: I607_11795
Entry
I607_11795        CDS       T02720                                 
Symbol
cysS
Name
(GenBank) cysteinyl-tRNA ligase
  KO
K01883  cysteinyl-tRNA synthetase [EC:6.1.1.16]
Organism
amal  Alteromonas mediterranea U4
Pathway
amal00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:amal00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    I607_11795 (cysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:amal01007]
    I607_11795 (cysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amal03016]
    I607_11795 (cysS)
Enzymes [BR:amal01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.16  cysteine---tRNA ligase
     I607_11795 (cysS)
Amino acid related enzymes [BR:amal01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   I607_11795 (cysS)
Transfer RNA biogenesis [BR:amal03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    I607_11795 (cysS)
 Prokaryotic type
    I607_11795 (cysS)
SSDB
Motif
Pfam: tRNA-synt_1e DALR_2 tRNA-synt_1g tRNA-synt_1 tRNA-synt_1f
Other DBs
NCBI-ProteinID: AGP86144
Position
complement(2631837..2633219)
AA seq 460 aa
MLHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLD
VKYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDE
IIEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLD
FVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVA
QSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRS
QLSYSQDNITQAKAALERLYTALRGVVVNESTDLSYGGYLARFEAAMNDDLNVPEAFSVL
FDVARELNRQKDNAEEAGKLAAVLKGLGAILGMLQSDPDTYLKGGEGNDDEAAEIEALIK
QRNDARASKDWAAADAARDALNAKGVVLEDGPSGTTWRKA
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgctacatctttacaatacccgaacccgtgaaaaagcgaagtttgttccgcttcaagaa
gggaaagtgggtttgtatgtgtgtggtatcaccgtttatgacctaagtcacatgggccat
gcccgtacttacctaagtttcgacgtgttagtacgctatttgcgccaccttggtttagac
gttaagtacgtgcgtaatatcacagacatagacgacaaaattattgctcgcgctaatgaa
aacggcgaaagcttcgaagcactcacggcacgtactatcgccatgatgcacgaagacttt
gcagcgattaacctactagagccagatgttgagccgacagtaagcggccacatggatgaa
attatagaaatcattcagcgcctgatggataaaggctacgcttatcaagctaaaagcggc
gatgtgctattcgacgtaagtaagtatgaagattacggcaagctaagcaaacaagactta
gatcagcttaaagccggtgcccgtgttgaagtggcggcaggtaaagatgacccgctagac
ttcgtgctgtggaagaccaccaagcctggagagcctgcatggcaatcgccatggggcgaa
ggccgcccgggctggcacattgaatgttctgcaatgaatcataagcatcttggtgcgcac
tttgatattcacggcggtggctcagatttaaccttcccgcaccatgaaaatgaagtggct
cagtcgtgctgcgcatatgatacgccttacgtaaacgtgtggatgcacgcgggtatggtt
caagttaacgacgaaaaaatgtctaaatcgttgggtaacttttttactttacgcgatgtg
ctaaaagagcacgattcagaaaccttgcgtttctttttgatgtcggcgcattatcgtagc
cagttaagttactctcaagacaatatcacccaagcgaaagcggcgctggagcgtttatat
actgcgctgcgtggtgttgtagtaaatgagagcacagaccttagctacggtggctaccta
gcgcgtttcgaagcggctatgaacgatgacctaaacgtacctgaagccttttcggtattg
ttcgatgtggcacgtgagcttaaccgccaaaaagacaatgctgaagaagccggtaaactg
gctgctgttcttaaaggcctaggcgcaattttgggtatgcttcaaagcgacccagatact
taccttaaaggcggtgaaggcaatgacgatgaagcggctgaaattgaagcgttaattaaa
cagcgtaacgatgcccgtgcctccaaagattgggcagcggcagatgccgcacgcgatgcg
ttaaacgcaaaaggcgtagtgttagaagacggcccaagcggtactacgtggcgtaaagca
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system