KEGG   Alteromonas mediterranea U8: I634_08240
Entry
I634_08240        CDS       T02722                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
amao  Alteromonas mediterranea U8
Pathway
amao03030  DNA replication
amao03430  Mismatch repair
amao03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I634_08240
   03430 Mismatch repair
    I634_08240
   03440 Homologous recombination
    I634_08240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amao03032]
    I634_08240
   03400 DNA repair and recombination proteins [BR:amao03400]
    I634_08240
Enzymes [BR:amao01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I634_08240
DNA replication proteins [BR:amao03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I634_08240
DNA repair and recombination proteins [BR:amao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I634_08240
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AGP93366
Position
1880999..1881718
AA seq 239 aa
MRQIVLDTETTGIDPKEGHRIIEIGCVEVVNRRLTGNHFHVYINPGRHIEQEAIEVHGIT
NEFLTDKPTFAQVAQEFVNFIKGAQLVIHNAPFDVGFMDHEFGMEPSTKGVITNQICDVL
DTLTLARQMHPGQKNNLDALCKRYGIDNSHRTLHGALLDAEILADVYLLMTGGQTKLKLA
SSGGSETDSTAIRRVQRKTNKLKVIKASADELTQHEARLDIVEKAGGKCLWRPNVDEVS
NT seq 720 nt   +upstreamnt  +downstreamnt
atgcgccaaattgtactcgatactgaaaccactggtattgatcccaaagaaggccaccgt
attatcgaaattggctgtgttgaagtcgtaaaccgccggttaacggggaatcacttccat
gtgtatatcaacccaggccggcatatagaacaagaggctatcgaagttcacggcattacg
aatgagtttcttaccgataaaccaacgtttgcgcaggttgcacaagagttcgtgaacttt
ataaaaggggcgcagttagttattcacaacgccccgtttgacgtcgggtttatggaccat
gaatttggcatggagccgtcgactaaaggggttatcaccaatcaaatttgtgatgtgctc
gatacgcttaccctcgctcgacaaatgcacccgggccagaaaaataatcttgatgcacta
tgtaaacgctacggcatagacaacagccaccgtacgctccacggcgcgctgctggatgca
gagatattagccgacgtttatctcttgatgaccggcggtcagactaagttaaaacttgca
tcatcaggtggtagtgaaactgactccaccgcaatcagacgagtgcagcgcaaaacaaat
aaattaaaggttatcaaagcgtccgccgatgagttaacacaacacgaagctcgtctagac
attgttgaaaaggcgggtggaaaatgtttgtggcgccctaatgttgacgaggtgtcttaa

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