KEGG   Alteromonas mediterranea U8: I634_18305
Entry
I634_18305        CDS       T02722                                 
Name
(GenBank) ada regulatory protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
amao  Alteromonas mediterranea U8
Pathway
amao03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I634_18305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amao03000]
    I634_18305
   03400 DNA repair and recombination proteins [BR:amao03400]
    I634_18305
Enzymes [BR:amao01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     I634_18305
Transcription factors [BR:amao03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    I634_18305
DNA repair and recombination proteins [BR:amao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     I634_18305
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC SAYSvFN HhH-GPD DUF6233 DUF3196
Other DBs
NCBI-ProteinID: AGP95337
Position
complement(4173481..4174908)
AA seq 475 aa
MSDSKASQNEALTESVFSKARLSRDPRFDGRFFVGVKTTGIFCRPICPARLPKEDNVTYY
QLAAQAMADGYRPCFRCRPDSAPSSAAWKGVGATVGRALSLLSSLPTERVGDIATRLGIS
ERYLNKLVVNAVGMGPKKFQNMQRTLFAKQLIQQTHLSMTDIATTGGYQSLRQLQRAVEQ
FCATTPSKLRKKEPATQKVITLFLSYRPPYNWPYVREFLAARAISGMEVVSDNSYGRYFS
CGESIGYFNAVHNEARHGFELHIDMPDLRNLHKTIENIKLLLDLHADPLLIEESLKQAGL
PDNALTAGLRLPSAWSVFESGCRAIVGQQVSVKAAIGQVTLLVHQLGKKGAVSDKYNTNS
TAYYCFPTPEAVAGNNLAFLRMPQARKEAVRQFACLFLNDKVPNHKEILAIKGVGPWTLD
YLKMRGERNPDVYLEGDLIVRKMAQRYPVEPAQAAPWRSYLTLQLWQLSNQQKEV
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtctgacagcaaggcttcccaaaacgaggcattaaccgaatcggtcttttcaaaggca
aggcttagccgagatccccgattcgacgggcgtttctttgtgggcgtaaaaacgaccgga
atattttgcaggcctatttgcccggcaaggctccctaaagaagacaatgtcacttattac
cagcttgcagcgcaagcgatggcagatggttatcgcccttgttttcggtgtaggcctgac
agcgcgccaagctctgccgcgtggaaaggcgtaggggcaaccgtagggcgggcgttgtcg
cttctttcttcccttcctacagagcgcgtgggtgatattgcgacgcgccttggtataagc
gagcggtatctcaataagctggtggtgaatgcggtaggtatggggccaaaaaagtttcaa
aatatgcagcgtacgctatttgctaaacagcttattcaacaaacccatttgtctatgaca
gatatcgctacaacaggaggttatcagtcacttcgacaattgcagcgtgcggtagagcag
ttctgtgctaccacgccctctaagctaaggaaaaaagagcccgctacccaaaaggtgatt
acattgtttctttcttatcggccgccttacaactggccttacgtcagagagtttttagcc
gcacgcgctatttcaggtatggaagtcgttagtgataacagctacgggcgctatttttct
tgtggtgaaagtattggctatttcaacgcggtgcataatgaagctcgccatggctttgag
ttgcatattgatatgccagatttacgcaacctgcataaaacgattgaaaatatcaagtta
ttactcgaccttcacgctgacccactgcttattgaagagagtttaaagcaagcaggctta
cctgataatgcattaactgcggggttacggctaccgagcgcttggagtgtatttgaaagt
ggatgtcgcgctattgtaggccaacaagttagcgttaaagcggccatcggacaggttacg
ctgctggtacatcagttagggaaaaaaggcgctgtatccgacaagtacaataccaactca
acagcatactattgcttcccaacacccgaagcggttgcggggaataacttggcgtttctg
cgtatgccgcaagcaagaaaagaggctgtgcggcagtttgcctgtttatttttgaatgat
aaggtaccaaaccacaaggaaatactggcaataaagggggtggggccctggacgttagat
tatttgaaaatgagaggtgagcgaaaccctgacgtttaccttgaaggcgatttaattgtg
cgaaaaatggcgcagcgatatcctgtagaacctgcacaggccgcaccatggcgtagctat
ttaacccttcagttgtggcaacttagcaatcaacaaaaagaggtctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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